Gene Information

Name : STMMW_31371 (STMMW_31371)
Accession : YP_005234160.1
Strain : Salmonella enterica D23580
Genome accession: NC_016854
Putative virulence/resistance : Virulence
Product : two-component system response regulator
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3332040 - 3332699 bp
Length : 660 bp
Strand : +
Note : pfam_scan;Pfam:PF00486; E()=4.7E-23;score=80.0;query145- 216;description=Trans_reg_C; pfam_scan;Pfam:PF00072; E()=2.2E-23;score=82.1;query3- 112;description=Response_reg

DNA sequence : 
ATGCGAATTTTACTGGTAGAAGATGACACACTTATTGGCGATGGCATAAAAGCGGGCCTGAGTAAAATGGGTTTCAGCGT
CGACTGGTTTACCGAGGGACGTCCGGGCAAAGAGGCGCTTTACAGCGCGCCTTATGATGCGGTTATTTTAGATTTGACGC
TGCCAGGCATGGACGGACGGGATATTTTGCGCGAATGGCGCGAAAAGGGTAAACAGGAACCGGTACTGATCCTGACGGCG
CGCGACGCGTTAGCAGAGCGCGTCGAGGGGCTACGTCTGGGCGCCGATGACTATTTATGTAAACCTTTCGCGCTCATTGA
GGTCGCCGCCCGTCTGGAGGCGCTGGTACGCCGCGCCAGCGGTCAGGCCAGTAGCGAATTGCGCCACGGCCAGGTGACGC
TCAATCCAGGCAATCTCGTCGCGACGCTTGCCGGCGAACCACTGGCCCTAAAACCAAAAGAGTTCGCGTTGCTGGAACTC
TTACTGCGCAACAAAGGTCGCGTGCTGCCGCGCAAGCTTATTGAAGAGAAGCTGTATAACTGGGATGACGACGTGTCCAG
CAATGCAGTGGAAGTCCATGTTCATCATTTACGCCGCAAGCTCGGCAGCGAATTTATTCGCACCGTGCACGGCATCGGCT
ACACCCTGGGTGACGCATGA

Protein sequence : 
MRILLVEDDTLIGDGIKAGLSKMGFSVDWFTEGRPGKEALYSAPYDAVILDLTLPGMDGRDILREWREKGKQEPVLILTA
RDALAERVEGLRLGADDYLCKPFALIEVAARLEALVRRASGQASSELRHGQVTLNPGNLVATLAGEPLALKPKEFALLEL
LLRNKGRVLPRKLIEEKLYNWDDDVSSNAVEVHVHHLRRKLGSEFIRTVHGIGYTLGDA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
armR AAN62112.1 putative response-regulator ArmR Not tested PAGI-2(C) Protein 4e-34 48

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
STMMW_31371 YP_005234160.1 two-component system response regulator BAC0487 Protein 1e-34 46
STMMW_31371 YP_005234160.1 two-component system response regulator BAC0308 Protein 2e-30 43
STMMW_31371 YP_005234160.1 two-component system response regulator BAC0638 Protein 6e-26 42
STMMW_31371 YP_005234160.1 two-component system response regulator NC_002516.2.879194.p Protein 2e-23 41
STMMW_31371 YP_005234160.1 two-component system response regulator BAC0347 Protein 3e-28 41
STMMW_31371 YP_005234160.1 two-component system response regulator BAC0083 Protein 2e-30 41
STMMW_31371 YP_005234160.1 two-component system response regulator BAC0111 Protein 3e-28 41
STMMW_31371 YP_005234160.1 two-component system response regulator BAC0197 Protein 5e-30 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
STMMW_31371 YP_005234160.1 two-component system response regulator VFG0473 Protein 7e-35 47
STMMW_31371 YP_005234160.1 two-component system response regulator VFG1390 Protein 2e-26 41