|
Name : STMMW_30371 (STMMW_30371) Accession : YP_005234061.1 Strain : Salmonella enterica D23580 Genome accession: NC_016854 Putative virulence/resistance : Unknown Product : transketolase Function : - COG functional category : - COG ID : - EC number : - Position : 3227651 - 3229642 bp Length : 1992 bp Strand : - Note : pfam_scan;Pfam:PF00456; E()=1.1E-169;score=562.9;query 4-334;description=Transketolase_N; pfam_scan;Pfam:PF02779; E()=1.1E-51;score=174.2;query 354-524;description=Transket_pyr; pfam_scan;Pfam:PF02780; E()=1.9E-9;score=36.9;query 549-654;description=Trans DNA sequence : ATGTCCTCACGTAAAGAGCTTGCCAATGCTATTCGTGCGCTGAGCATGGACGCAGTACAGAAAGCCAAGTCCGGTCACCC GGGTGCCCCGATGGGTATGGCTGACATTGCCGAAGTCCTGTGGCGTGATTTCCTGAACCACAACCCGACCAACCCGTCCT GGGCCGACCGCGACCGCTTCGTGCTGTCCAATGGCCACGGCTCAATGCTGATTTACAGCCTGCTGCACCTCACCGGTTAT GACCTGCCGATGTCCGAGCTGCAGAATTTCCGTCAGCTACATTCAAAAACCCCTGGTCACCCGGAAGTGGGCTACACCGC TGGCGTTGAAACCACTACTGGCCCGCTGGGTCAGGGTATTGCCAACGCCGTCGGGATGGCGATTGCCGAGAAAACTCTGG CGGCGCAGTTTAATCGTCCTGGCCACGATATCGTTGACCACTTCACCTACGTCTTTATGGGCGACGGCTGCATGATGGAA GGCATTTCTCACGAAGTGTGCTCTCTGGCTGGTACTCTGAAACTGGGCAAACTGATCGCGTTCTATGATGACAACGGTAT CTCTATCGATGGTCATGTTGAAGGCTGGTTCACCGATGACACCGCGAAACGTTTTGAAGCCTACGGCTGGCACGTTATCC GTGGCATTGACGGTCACGATGCCGACGCCATTAAACGCGCCACGGAAGAAGCTCGCGCCGTGACTGACAAACCGTCCCTG CTGATGTGCAAAACCATCATCGGTTTCGGTTCGCCGAACAAACAGGGTACCCACGATTCCCACGGCGCGCCGCTGGGCGA CGCGGAAATCGCGCTGACCCGCGAACAGTTGGGCTGGAAATACGCGCCGTTCGAAATCCCGTCTGAAATCTACGCCCAGT GGGATGCGAAAGAAGCCGGCCAGGCGAAAGAGTCTGCATGGAATGAGAAATTCGCGGCTTATGAGAAAGCCTTCCCGCAG GAAGCTGCTGAATTCACTCGTCGTATGAAAGGCGACATGCCGGCTGACTTCGATGCGAAAGCGAATGAGTTCATCGCTAA ACTGCAGGCGAATCCATCCAAAATCGCCAGCCGTAAAGCGTCCCAGAATACCATCGAAGCCTTCGGTCCGCTGTTGCCGG AATTCCTCGGCGGCTCCGCTGACCTGGCTCCTTCTAACCTGACCCTGTGGTCCGGTTCGAAAGCGATTAACGAAGATGCC GCAGGTAACTACATTCATTACGGTGTGCGCGAATTCGGTATGACCGCTATCGCCAACGGTATCGCCCTGCACGGCGGTTT CCTGCCGTACACCTCCACCTTCCTGATGTTCGTCGAATATGCCCGTAACGCAGTGCGTATGGCAGCGTTGATGAAACAAC GTCAGGTGATGGTGTACACCCACGACTCCATCGGTCTGGGCGAAGATGGCCCGACGCACCAGCCGGTCGAGCAGGTGGCA AGCCTGCGCGTAACGCCGAACATGTCCACATGGCGTCCGTGCGACCAGGTGGAATCCGCGGTGGCGTGGAAATATGGCGT AGAGCGTCAGGATGGCCCAACCGCGCTGATCCTCTCCCGTCAGAACCTGGCGCAGCAGGAACGTACTGAAGAGCAACTGG CGAATATCGCCCGCGGTGGTTACGTACTGAAAGATTGTGCGGGCCAGCCGCAGATTATCTTCATTGCGACCGGTTCAGAG GTTGAGCTGGCGGTTGCCGCTTACGAAAAACTGACTGCCGAAGGCGTGAAGGCGCGCGTGGTTTCCATGCCGTCCACCGA CGCGTTCGACAAGCAGGATGCGGCTTACCGTGAATCCGTGCTGCCGAAGGCGGTCTCTGCGCGTGTGGCGATTGAAGCGG GTATCGCTGACTACTGGTTCAAATACGTCGGCCTGAACGGCGCTATTGTCGGGATGACCACCTTCGGTGAGTCTGCTCCG GCAGAGCTGTTGTTTGAAGAGTTTGGCTTCACGGTGGACAACGTGATCGCCAAAGCGAAAGCACTGCTGTAA Protein sequence : MSSRKELANAIRALSMDAVQKAKSGHPGAPMGMADIAEVLWRDFLNHNPTNPSWADRDRFVLSNGHGSMLIYSLLHLTGY DLPMSELQNFRQLHSKTPGHPEVGYTAGVETTTGPLGQGIANAVGMAIAEKTLAAQFNRPGHDIVDHFTYVFMGDGCMME GISHEVCSLAGTLKLGKLIAFYDDNGISIDGHVEGWFTDDTAKRFEAYGWHVIRGIDGHDADAIKRATEEARAVTDKPSL LMCKTIIGFGSPNKQGTHDSHGAPLGDAEIALTREQLGWKYAPFEIPSEIYAQWDAKEAGQAKESAWNEKFAAYEKAFPQ EAAEFTRRMKGDMPADFDAKANEFIAKLQANPSKIASRKASQNTIEAFGPLLPEFLGGSADLAPSNLTLWSGSKAINEDA AGNYIHYGVREFGMTAIANGIALHGGFLPYTSTFLMFVEYARNAVRMAALMKQRQVMVYTHDSIGLGEDGPTHQPVEQVA SLRVTPNMSTWRPCDQVESAVAWKYGVERQDGPTALILSRQNLAQQERTEEQLANIARGGYVLKDCAGQPQIIFIATGSE VELAVAAYEKLTAEGVKARVVSMPSTDAFDKQDAAYRESVLPKAVSARVAIEAGIADYWFKYVGLNGAIVGMTTFGESAP AELLFEEFGFTVDNVIAKAKALL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| tktA | AAO17218.1 | TktA | Not tested | tcd island | Protein | 0.0 | 82 |
| APECO1_2641 | YP_859417.1 | transketolase | Not tested | Not named | Protein | 0.0 | 69 |
