Gene Information

Name : STMMW_03101 (STMMW_03101)
Accession : YP_005231377.1
Strain : Salmonella enterica D23580
Genome accession: NC_016854
Putative virulence/resistance : Virulence
Product : atypical fimbria chaperone
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 342800 - 343513 bp
Length : 714 bp
Strand : +
Note : pfam_scan;Pfam:PF00345; E()=2.0E-35;score=121.1;query 29-152;description=Pili_assembly_N; pfam_scan;Pfam:PF02753; E()=6.7E-21;score=73.7;query158- 230;description=Pili_assembly_C

DNA sequence : 
ATGGCGGTAGCTTTGTTCGCCACTAATTCTATGGTTTCAGTATATGCCGTCAACCAGCAATTAAATTCAGCCACTAAATT
ATTCAGCGTGAAGCTGGGGGCTACACGAGTGATTTATCACGCTGGTACGGCTGGAGCGACGCTCTCGGTGAGCAACCCGC
AGAATTACCCTATTTTGGTTCAGTCTTCAGTCAAAGCAGCAGACAAAAGTTCGCCTGCTCCCTTTTTGGTGATGCCGCCT
CTATTTCGTTTAGAAGCAAACCAGCAGAGTCAACTGCGTATTGTCCGTACTGGTGGTGACATGCCAACGGATCGTGAGAC
TTTACAGTGGGTCTGTATAAAGGCGGTACCACCCGAAAATGAACCGTCGGATACACAGGCTAAGGGCGCGACCCTTGACC
TCAATTTGTCCATCAACGCCTGTGATAAGCTGATTTTCCGCCCGGATGCCGTGAAGGGGACGCCGGAAGATGTTGCAGGA
AATTTAAGATGGGTGGAGACGGGCAACAAACTTAAGGTGGAGAACCCCACCCCGTTTTACATGAATTTAGCCTCTGTCAC
AGTAGGGGGAAAGCCCATTACAGGGCTTGAGTATGTCCCCCCCTTTGCTGACAAAACACTAAATATGCCAGGTAGTGCCC
ATGGTGATATCGAGTGGAGAGTTATTACAGACTTTGGTGGTGAAAGTCATCCGTTCCACTACGTTCTTAAATAA

Protein sequence : 
MAVALFATNSMVSVYAVNQQLNSATKLFSVKLGATRVIYHAGTAGATLSVSNPQNYPILVQSSVKAADKSSPAPFLVMPP
LFRLEANQQSQLRIVRTGGDMPTDRETLQWVCIKAVPPENEPSDTQAKGATLDLNLSINACDKLIFRPDAVKGTPEDVAG
NLRWVETGNKLKVENPTPFYMNLASVTVGGKPITGLEYVPPFADKTLNMPGSAHGDIEWRVITDFGGESHPFHYVLK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
safB NP_454906.1 periplasmic fimbrial chaperone protein Not tested SPI-6 Protein 3e-102 92
afaB AAK16197.1 AfaB Virulence PAI-I AL862 Protein 5e-55 49
afaB ADD91742.1 putative AfaB-VIII periplasmic chaperone Not tested PAI-I AL862 Protein 5e-55 49

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
STMMW_03101 YP_005231377.1 atypical fimbria chaperone VFG0943 Protein 1e-52 49
STMMW_03101 YP_005231377.1 atypical fimbria chaperone VFG0850 Protein 3e-56 48
STMMW_03101 YP_005231377.1 atypical fimbria chaperone VFG0858 Protein 8e-53 48
STMMW_03101 YP_005231377.1 atypical fimbria chaperone VFG0852 Protein 8e-55 47