|
Name : STMMW_28721 (STMMW_28721) Accession : YP_005233898.1 Strain : Salmonella enterica D23580 Genome accession: NC_016854 Putative virulence/resistance : Virulence Product : DNA mismatch repair protein Function : - COG functional category : - COG ID : - EC number : - Position : 3043309 - 3045834 bp Length : 2526 bp Strand : + Note : pfam_scan;Pfam:PF00488; E()=1.3E-107;score=358.1;query 555-786;description=MutS_V; pfam_scan;Pfam:PF05190; E()=1.7E-30;score=104.5;query 416-505;description=MutS_IV; pfam_scan;Pfam:PF05192; E()=3.8E-67;score=226.0;query 253-551;description=MutS_III; pfam_ DNA sequence : ATGATGCAGCAGTATCTCAAGCTGAAAGCCCAGCATCCGGAGATCCTGCTCTTTTATCGTATGGGAGACTTTTACGAGCT GTTTTATGACGACGCAAAGCGTGCGTCGCAGTTGCTCGATATTTCGCTGACCAAACGCGGCGCATCGGCTGGCGAACCTA TCCCTATGGCGGGTATCCCGCACCACGCCGTAGAAAACTACCTCGCGAAACTGGTCAATCAGGGCGAATCCGTCGCTATT TGCGAACAGATTGGCGATCCGGCCACCAGCAAAGGTCCCGTTGAACGTAAGGTCGTGCGTATCGTTACGCCTGGCACTAT CAGCGATGAAGCCCTGTTACAGGAGCGTCAGGATAACCTGCTGGCGGCTATCTGGCAGGATGGTAAAGGTTACGGTTACG CCACGCTGGATATCAGCTCCGGGCGCTTTCGTCTGAGCGAACCCGCCGACCGTGAAACGATGGCCGCAGAGCTGCAGCGC ACCAATCCCGCCGAACTGTTGTATGCCGAAGATTTTGCTGAAATGGCGTTAATAGAGGGACGCCGGGGTCTGCGCCGTCG CCCGTTGTGGGAGTTTGAGATTGATACCGCCCGCCAGCAGTTAAATCTGCAGTTCGGTACGCGGGATCTGGTCGGTTTCG GCGTCGAAAATGCCTCGCGTGGATTATGTGCGGCAGGCTGCCTGTTACAGTACGTAAAAGATACCCAGCGCACCTCCCTG CCGCATATTCGTTCCATTACGATGGAACGCCAGCAGGACAGCATCATTATGGATGCCGCGACCCGCCGCAATCTGGAAAT TACCCAGAACCTGGCCGGTGGTGTCGAAAATACCCTCGCCGCGGTGCTTGACTGTACCGTGACGCCAATGGGTAGCCGAA TGCTTAAACGCTGGCTGCATATGCCGGTACGAAATACCGACATATTACGTGAACGCCAGCAGACCATCGGCGCCTTGCAG GACACCGTCAGCGAACTGCAACCGGTGCTGCGTCAGGTCGGCGATTTGGAGCGTATCCTTGCGCGTCTGGCGCTGCGCAC CGCGCGTCCGCGCGATCTCGCCCGAATGCGTCACGCCTTCCAGCAGCTGCCGGAATTGCACGCTCAGCTTGAAACCGTTG ACAGCGCGCCGGTACAGGCGTTGCGTAAAAAAATGGGCGATTTCGCCGAGCTGCGCGACCTCCTGGAACGCGCCATTATT GACGCGCCGCCGGTACTGGTCCGCGACGGCGGCGTTATTGCGCCCGGCTACCATGAAGAGCTGGACGAATGGCGCGCGCT GGCGGACGGCGCCACCGATTATCTCGATCGTCTGGAAATTCGCGAGCGCGAGCGTACCGGGCTGGATACGCTGAAAGTCG GCTATAACGCGGTACATGGTTATTACATTCAGATTAGCCGTGGTCAAAGCCATCTGGCGCCCATCAATTATGTGCGTCGC CAGACGCTGAAAAATGCCGAACGCTACATTATTCCTGAGCTTAAAGAGTACGAAGATAAAGTTCTGACCTCGAAAGGCAA AGCGCTGGCGCTGGAAAAACAGCTATATGACGAATTGTTTGATCTGCTGTTGCCGCATCTGGCCGATTTACAGCAGAGCG CCAACGCGCTGGCGGAGCTGGATGTGCTGGTTAACCTGGCCGAACGCGCCTGGACGCTGAATTACACCTGCCCGACATTT ACCGATAAACCCGGTATCCGTATTACCGAAGGTCGCCACCCGGTGGTTGAACAGGTACTGAATGAGCCGTTTATCGCTAA CCCGCTCAATTTATCGCCGCAGCGCCGGATGTTGATCATTACCGGCCCCAATATGGGCGGTAAAAGTACCTATATGCGAC AAACGGCATTGATTGCCCTGCTGGCCTATATCGGCAGTTACGTTCCGGCGCAAAACGTGGAAATCGGCCCCATCGACCGT ATTTTTACCCGCGTCGGCGCAGCGGACGACCTGGCCTCCGGGCGTTCGACCTTTATGGTGGAGATGACCGAAACCGCGAA CATTCTGCATAATGCCACGGAAAACAGTCTGGTATTGATGGATGAAATCGGGCGCGGTACCTCCACGTATGACGGGCTGT CGTTGGCCTGGGCCTGCGCGGAGAATCTCGCGAATAAGATTAAAGCGTTAACGCTGTTCGCTACCCACTACTTCGAGCTG ACCCAATTACCGGAGAAAATGGAAGGCGTGGCGAACGTCCACCTGGATGCGCTGGAACACGGCGATACTATCGCGTTTAT GCACAGCGTGCAGGACGGCGCGGCAAGTAAGAGCTATGGCCTGGCGGTCGCGGCGCTTGCGGGCGTCCCTAAAGAAGTCA TCAAACGCGCGCGCCAGAAACTCCGCGAGCTGGAAAGCATCTCGCCCAATGCGGCGGCAACGCAGGTGGACGGCACGCAA ATGTCGTTGCTTGCCGCCCCGGAGGAGACATCGCCTGCCGTTGAAGCGCTGGAGAATCTCGATCCGGACTCCCTGACGCC ACGCCAGGCGCTGGAGTGGATCTATCGGCTGAAAAGTCTGGTGTAA Protein sequence : MMQQYLKLKAQHPEILLFYRMGDFYELFYDDAKRASQLLDISLTKRGASAGEPIPMAGIPHHAVENYLAKLVNQGESVAI CEQIGDPATSKGPVERKVVRIVTPGTISDEALLQERQDNLLAAIWQDGKGYGYATLDISSGRFRLSEPADRETMAAELQR TNPAELLYAEDFAEMALIEGRRGLRRRPLWEFEIDTARQQLNLQFGTRDLVGFGVENASRGLCAAGCLLQYVKDTQRTSL PHIRSITMERQQDSIIMDAATRRNLEITQNLAGGVENTLAAVLDCTVTPMGSRMLKRWLHMPVRNTDILRERQQTIGALQ DTVSELQPVLRQVGDLERILARLALRTARPRDLARMRHAFQQLPELHAQLETVDSAPVQALRKKMGDFAELRDLLERAII DAPPVLVRDGGVIAPGYHEELDEWRALADGATDYLDRLEIRERERTGLDTLKVGYNAVHGYYIQISRGQSHLAPINYVRR QTLKNAERYIIPELKEYEDKVLTSKGKALALEKQLYDELFDLLLPHLADLQQSANALAELDVLVNLAERAWTLNYTCPTF TDKPGIRITEGRHPVVEQVLNEPFIANPLNLSPQRRMLIITGPNMGGKSTYMRQTALIALLAYIGSYVPAQNVEIGPIDR IFTRVGAADDLASGRSTFMVEMTETANILHNATENSLVLMDEIGRGTSTYDGLSLAWACAENLANKIKALTLFATHYFEL TQLPEKMEGVANVHLDALEHGDTIAFMHSVQDGAASKSYGLAVAALAGVPKEVIKRARQKLRELESISPNAAATQVDGTQ MSLLAAPEETSPAVEALENLDPDSLTPRQALEWIYRLKSLV |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| mutS | AAA80578.1 | DNA mismatch repair protein | Virulence | SPI-1 | Protein | 0.0 | 94 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| STMMW_28721 | YP_005233898.1 | DNA mismatch repair protein | VFG0562 | Protein | 0.0 | 100 |
