Gene Information

Name : STMMW_28591 (STMMW_28591)
Accession : YP_005233886.1
Strain : Salmonella enterica D23580
Genome accession: NC_016854
Putative virulence/resistance : Virulence
Product : cell invasion protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3033470 - 3034588 bp
Length : 1119 bp
Strand : -
Note : pfam_scan;Pfam:PF07201; E()=2.6E-44;score=150.5;query 51-211;description=HrpJ

DNA sequence :
ATGATTCCTGGCTCAACCTCCGGTATTTCATTTTCCAGAATATTGTCCCGGCAGACATCTCATCAGGATGCGACCCAGCA
TACTGATGCGCAACAGGCGGAAATACAACAGGCCGCAGAGGATTCGTCTCCAGGGGCGGAAGTACAAAAATTTGTCCAGT
CGACGGACGAAATGTCAGCGGCGCTGGCGCAATTTCGTAACCGTCGCGATTATGAAAAAAAATCCAGTAATTTATCTAAC
AGTTTTGAACGCGTGCTGGAGGATGAGGCTTTACCGAAGGCGAAGCAAATCTTAAAGCTAATTAGCGTACATGGCGGCGC
GTTAGAAGATTTTTTACGTCAGGCGCGTAGCTTATTTCCTGACCCCAGTGATTTAGTCCTTGTGTTACGCGAATTGCTTC
GTCGTAAAGACCTGGAAGAGATCGTGCGGAAAAAGCTGGAGTCGTTACTTAAGCACGTTGAAGAGCAAACCGATCCGAAG
ACCCTCAAGGCAGGGATTAATTGTGCGTTGAAGGCCCGGCTTTTTGGGAAAACATTATCGTTAAAACCAGGCTTATTGCG
CGCCAGCTATCGGCAATTTATCCAGAGTGAATCACATGAAGTGGAGATTTACTCTGACTGGATAGCCAGTTATGGCTATC
AACGTCGACTGGTGGTACTGGATTTTATTGAGGGTTCGCTATTAACCGATATTGACGCGAATGACGCCAGCTGTTCGCGC
CTGGAGTTTGGCCAGCTTTTACGACGCCTGACGCAACTTAAAATGTTGCGCTCCGCTGACCTACTGTTTGTGAGTACATT
GTTGTCGTATTCGTTTACCAAAGCGTTTAATGCGGAGGAGTCGTCGTGGTTACTACTGATGCTTTCGCTATTGCAACAGC
CACATGAAGTGGATTCGCTGTTAGCCGATATTATAGGTTTGAATGCGTTATTGCTTAGTCATAAAGAACATGCATCCTTT
TTGCAGATATTTTATCAAGTATGTAAAGCCATACCCTCTTCACTCTTTTATGAAGAATATTGGCAGGAAGAATTGTTAAT
GGCGTTACGTAGTATGACCGATATTGCCTACAAGCATGAAATGGCAGAACAGCGTCATACTATTGAAAAGCTGTCTTAA

Protein sequence :
MIPGSTSGISFSRILSRQTSHQDATQHTDAQQAEIQQAAEDSSPGAEVQKFVQSTDEMSAALAQFRNRRDYEKKSSNLSN
SFERVLEDEALPKAKQILKLISVHGGALEDFLRQARSLFPDPSDLVLVLRELLRRKDLEEIVRKKLESLLKHVEEQTDPK
TLKAGINCALKARLFGKTLSLKPGLLRASYRQFIQSESHEVEIYSDWIASYGYQRRLVVLDFIEGSLLTDIDANDASCSR
LEFGQLLRRLTQLKMLRSADLLFVSTLLSYSFTKAFNAEESSWLLLMLSLLQQPHEVDSLLADIIGLNALLLSHKEHASF
LQIFYQVCKAIPSSLFYEEYWQEELLMALRSMTDIAYKHEMAEQRHTIEKLS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
invE NP_457291.1 cell invasion protein Virulence SPI-1 Protein 3e-142 99
invE NP_806500.1 cell invasion protein Virulence SPI-1 Protein 3e-142 99
invE YP_217816.1 invasion protein Virulence SPI-1 Protein 2e-142 99
invE NP_461818.1 invasion protein Virulence SPI-1 Protein 2e-142 99
ECs3732 NP_311759.1 EivE Not tested LIM Protein 4e-45 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
STMMW_28591 YP_005233886.1 cell invasion protein VFG0558 Protein 9e-143 99