Gene Information

Name : STMMW_28571 (STMMW_28571)
Accession : YP_005233884.1
Strain : Salmonella enterica D23580
Genome accession: NC_016854
Putative virulence/resistance : Virulence
Product : secretory protein (associated with virulence)
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3030957 - 3031364 bp
Length : 408 bp
Strand : -
Note : pfam_scan;Pfam:PF03519; E()=3.5E-33;score=112.3;query 18-96;description=Invas_SpaK

DNA sequence :
ATGCAACATTTGGATATCGCTGAATTAGTTCGTTCCGCACTGGAAGTAAGTGGTTGCGATCCTTCATTAATTGGAGGAAT
AGATAGCCATTCAACAATTGTTCTGGATTTATTTGCATTGCCAAGTATCTGTATCAGCGTCAAGGACGATGATGTATGGA
TCTGGGCGCAATTGGGTGCTGACAGCATGGTGGTATTACAACAGCGGGCTTATGAAATCTTAATGACCATAATGGAAGGA
TGCCATTTTGCCCGCGGCGGGCAATTACTACTGGGGGAGCAGAATGGGGAGCTAACGCTTAAAGCCTTAGTGCATCCGGA
TTTTTTATCTGACGGTGAAAAGTTCTCTACTGCCTTGAATGGGTTTTACAACTATCTGGAAGTTTTTAGTCGGTCGCTAA
TGAGATGA

Protein sequence :
MQHLDIAELVRSALEVSGCDPSLIGGIDSHSTIVLDLFALPSICISVKDDDVWIWAQLGADSMVVLQQRAYEILMTIMEG
CHFARGGQLLLGEQNGELTLKALVHPDFLSDGEKFSTALNGFYNYLEVFSRSLMR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
spak NP_457289.1 secretory protein (associated with virulence) Virulence SPI-1 Protein 1e-51 100
spak NP_806498.1 virulence-associated secretory protein Virulence SPI-1 Protein 1e-51 100
invB NP_461816.1 secretion chaperone Virulence SPI-1 Protein 1e-51 100
invB YP_217814.1 surface presentation of antigens; secretory proteins Virulence SPI-1 Protein 1e-51 99

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
STMMW_28571 YP_005233884.1 secretory protein (associated with virulence) VFG0556 Protein 4e-52 100