|
Name : STMMW_28541 (STMMW_28541) Accession : YP_005233881.1 Strain : Salmonella enterica D23580 Genome accession: NC_016854 Putative virulence/resistance : Virulence Product : surface presentation of antigens protein (associated with type III secretion and virulence) Function : - COG functional category : - COG ID : - EC number : - Position : 3028234 - 3029244 bp Length : 1011 bp Strand : - Note : pfam_scan;Pfam:PF02510; E()=8.0E-214;score=708.4;query 1-336;description=SPAN DNA sequence : ATGGGCGATGTGTCAGCTGTCAGTTCATCCGGGAACATTTTACTGCCGCAGCAGGATGAGGTTGGCGGTTTATCAGAAGC ATTAAAAAAAGCGGTGGAAAAACATAAGACAGAATATTCCGGTGATAAAAAAGATCGCGACTATGGCGATGCTTTCGTAA TGCATAAAGAAACGGCTTTACCGTTATTACTGGCGGCATGGCGACATGGCGCGCCAGCGAAATCAGAACATCACAATGGC AACGTTTCTGGTCTGCATCATAACGGAAAAAGCGAACTCAGGATTGCTGAAAAACTGTTGAAAGTCACTGCTGAAAAATC TGTCGGTTTGATCTCTGCGGAGGCCAAAGTAGATAAATCCGCAGCGTTGCTATCGTCTAAAAATAGGCCGTTAGAAAGCG TAAGCGGTAAAAAATTATCTGCTGATTTAAAAGCTGTGGAATCCGTTAGTGAAGTAACCGATAACGCCACGGGAATCTCT GACGATAATATCAAGGCATTGCCTGGGGATAATAAAGCCATCGCGGGCGAAGGCGTTCGTAAAGAGGGCGCGCCGCTGGC GCGGGATGTCGCACCTGCCCGAATGGCCGCAGCCAATACCGGTAAGCCTGAAGATAAAGATCATAAAAAGGTTAAAGATG TTTCTCAGCTTCCGCTGCAACCAACCACTATCGCCGATCTTAGCCAATTAACCGGCGGCGATGAAAAAATGCCTTTAGCG GCGCAATCAAAGCCGATGATGACTATTTTTCCCACTGCCGATGGCGTGAAAGGAGAGGATAGCTCGCTGACTTACCGTTT TCAGCGCTGGGGAAATGACTATTCCGTCAATATTCAGGCGCGGCAAGCAGGGGAGTTTTCGTTAATACCGTCAAATACGC AGGTTGAACATCGTTTGCATGATCAATGGCAAAACGGTAATCCCCAGCGCTGGCACCTGACGCGAGACGATCAACAAAAT CCGCAGCAGCAACAGCACAGACAGCAATCTGGCGAGGAGGATGACGCCTGA Protein sequence : MGDVSAVSSSGNILLPQQDEVGGLSEALKKAVEKHKTEYSGDKKDRDYGDAFVMHKETALPLLLAAWRHGAPAKSEHHNG NVSGLHHNGKSELRIAEKLLKVTAEKSVGLISAEAKVDKSAALLSSKNRPLESVSGKKLSADLKAVESVSEVTDNATGIS DDNIKALPGDNKAIAGEGVRKEGAPLARDVAPARMAAANTGKPEDKDHKKVKDVSQLPLQPTTIADLSQLTGGDEKMPLA AQSKPMMTIFPTADGVKGEDSSLTYRFQRWGNDYSVNIQARQAGEFSLIPSNTQVEHRLHDQWQNGNPQRWHLTRDDQQN PQQQQHRQQSGEEDDA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| invJ | NP_461813.1 | needle length control protein | Virulence | SPI-1 | Protein | 4e-141 | 100 |
| spaN | NP_457286.1 | surface presentation of antigens protein (associated with type III secretion and virulence) | Virulence | SPI-1 | Protein | 9e-133 | 99 |
| spaN | NP_806495.1 | antigen presentation protein SpaN | Virulence | SPI-1 | Protein | 9e-133 | 99 |
| invJ | YP_217811.1 | surface presentation of antigens; secretory proteins | Virulence | SPI-1 | Protein | 1e-133 | 99 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| STMMW_28541 | YP_005233881.1 | surface presentation of antigens protein (associated with type III secretion and virulence) | VFG0553 | Protein | 2e-141 | 100 |
