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Name : STMMW_28451 (STMMW_28451) Accession : YP_005233872.1 Strain : Salmonella enterica D23580 Genome accession: NC_016854 Putative virulence/resistance : Virulence Product : pathogenicity island 1 effector protein Function : - COG functional category : - COG ID : - EC number : - Position : 3019743 - 3020774 bp Length : 1032 bp Strand : - Note : pfam_scan;Pfam:PF06511; E()=6.4E-165;score=547.9;query 5-341;description=IpaD DNA sequence : ATGCTTAATATTCAAAATTATTCCGCTTCTCCTCATCCGGGGATCGTTGCCGAACGGCCGCAGACTCCCTCGGCGAGCGA GCACGTCGAGACTGCCGTGGTACCGTCTACCACAGAACATCGCGGTACAGATATCATTTCATTATCGCAGGCGGCTACTA AAATCCACCAGGCACAGCAGACGCTGCAGTCAACGCCACCGATCTCTGAAGAGAATAATGACGAGCGCACGCTGGCGCGC CAGCAGTTGACCAGCAGCCTGAATGCGCTGGCGAAGTCCGGCGTGTCATTATCCGCAGAACAAAATGAGAACCTGCGGAG CGCGTTTTCTGCGCCGACGTCGGCCTTATTTAGCGCTTCGCCTATGGCGCAGCCGAGAACAACCATTTCTGATGCTGAGA TTTGGGATATGGTTTCCCAAAATATATCGGCGATAGGTGACAGCTATCTGGGCGTTTATGAAAACGTTGTCGCAGTCTAT ACCGATTTTTATCAGGCCTTCAGTGATATTCTTTCCAAAATGGGAGGCTGGTTATTACCAGGTAAGGACGGTAATACCGT TAAGCTAGATGTTACCTCACTCAAAAATGATTTAAACAGTTTAGTCAATAAATATAATCAAATAAACAGTAATACCGTTT TATTTCCAGCGCAGTCAGGCAGCGGCGTTAAAGTAGCCACTGAAGCGGAAGCGAGACAGTGGCTCAGTGAATTGAATTTA CCGAATAGCTGCCTGAAATCTTATGGATCCGGTTATGTCGTCACCGTTGATCTGACGCCATTACAAAAAATGGTTCAGGA TATTGATGGTTTAGGCGCGCCGGGAAAAGACTCAAAACTCGAAATGGATAACGCCAAATATCAAGCCTGGCAGTCGGGTT TTAAAGCGCAGGAAGAAAATATGAAAACCACATTACAGACGCTGACGCAAAAATATAGCAATGCCAATTCATTGTACGAC AACCTGGTAAAAGTGCTGAGCAGTACGATAAGTAGCAGCCTGGAAACCGCCAAAAGCTTCCTGCAAGGATAA Protein sequence : MLNIQNYSASPHPGIVAERPQTPSASEHVETAVVPSTTEHRGTDIISLSQAATKIHQAQQTLQSTPPISEENNDERTLAR QQLTSSLNALAKSGVSLSAEQNENLRSAFSAPTSALFSASPMAQPRTTISDAEIWDMVSQNISAIGDSYLGVYENVVAVY TDFYQAFSDILSKMGGWLLPGKDGNTVKLDVTSLKNDLNSLVNKYNQINSNTVLFPAQSGSGVKVATEAEARQWLSELNL PNSCLKSYGSGYVVTVDLTPLQKMVQDIDGLGAPGKDSKLEMDNAKYQAWQSGFKAQEENMKTTLQTLTQKYSNANSLYD NLVKVLSSTISSSLETAKSFLQG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| sipD | NP_461804.1 | translocation machinery component | Virulence | SPI-1 | Protein | 2e-155 | 100 |
| sipD | YP_217802.1 | cell invasion protein | Virulence | SPI-1 | Protein | 5e-154 | 99 |
| sipD | NP_457277.1 | pathogenicity island 1 effector protein | Virulence | SPI-1 | Protein | 5e-137 | 88 |
| sipD | NP_806486.1 | pathogenicity island 1 effector protein | Virulence | SPI-1 | Protein | 5e-137 | 88 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| STMMW_28451 | YP_005233872.1 | pathogenicity island 1 effector protein | VFG0544 | Protein | 1e-155 | 100 |
