Gene Information

Name : STMMW_28411 (STMMW_28411)
Accession : YP_005233868.1
Strain : Salmonella enterica D23580
Genome accession: NC_016854
Putative virulence/resistance : Virulence
Product : chaperone (associated with virulence)
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3016677 - 3017069 bp
Length : 393 bp
Strand : -
Note : pfam_scan;Pfam:PF05932; E()=6.2E-11;score=42.0;query5-120;description=CesT

DNA sequence :
TTGCAAGCACACCAGGATATTATCGCTAATATTGGTGAGAAATTGGGTTTACCGCTCACTTTTGACGACAACAATCAGTG
CTTATTATTACTCGATAGCGATATTTTTACGTCTATTGAAGCTAAAGATGATATCTGGTTATTGAACGGTATGATTATAC
CGTTATCGCCTGTTTGTGGCGATTCTATCTGGCGGCAGATTATGGTGATTAATGGTGAACTGGCTGCGAATAATGAAGGT
ACGTTAGCGTATATTGATGCCGCAGAGACGTTGTTGCTTATACATGCAATTACCGATCTGACAAATACTTACCATATTAT
ATCGCAGCTTGAGTCATTTGTGAATCAGCAGGAAGCGCTCAAAAACATACTGCAGGAATATGCTAAAGTATGA

Protein sequence :
MQAHQDIIANIGEKLGLPLTFDDNNQCLLLLDSDIFTSIEAKDDIWLLNGMIIPLSPVCGDSIWRQIMVINGELAANNEG
TLAYIDAAETLLLIHAITDLTNTYHIISQLESFVNQQEALKNILQEYAKV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
sicP NP_461800.1 secretion chaperone Virulence SPI-1 Protein 3e-54 100
sicP YP_217798.1 virulence associated chaperone Virulence SPI-1 Protein 3e-47 99
sicP NP_457273.1 chaperone (associated with virulence) Virulence SPI-1 Protein 2e-46 97
sicP NP_806482.1 chaperone Virulence SPI-1 Protein 2e-46 97

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
STMMW_28411 YP_005233868.1 chaperone (associated with virulence) VFG0541 Protein 7e-55 100