Gene Information

Name : STMMW_28341 (STMMW_28341)
Accession : YP_005233861.1
Strain : Salmonella enterica D23580
Genome accession: NC_016854
Putative virulence/resistance : Virulence
Product : pathogenicity 1 island effector protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3008739 - 3009044 bp
Length : 306 bp
Strand : -
Note : pfam_scan;Pfam:PF09392; E()=4.9E-7;score=29.5;query 44-100;description=MxiH

DNA sequence : 
ATGTCGATTGCAACTATTGTCCCTGAGAATGCCGTTATAGGGCAGGCGGTCAATATCAGGTCTATGGAAACGGACATTGT
CTCGCTGGATAACCGGCTACTCCAGGCTTTTTCTGGTTCGGCGATTGCCACGGCTGTGGATAAACAGACGATTACCAACA
GGATTGAGGACCCTAATCTGGTGACGGATCCTAAAGAGCTGGCTATTTCGCAAGAGATGATTTCAGATTATAACCTGTAT
GTTTCTATGGTCAGTACCCTTACTCGTAAAGGAGTCGGGGCTGTTGAAACGCTATTACGCTCATGA

Protein sequence : 
MSIATIVPENAVIGQAVNIRSMETDIVSLDNRLLQAFSGSAIATAVDKQTITNRIEDPNLVTDPKELAISQEMISDYNLY
VSMVSTLTRKGVGAVETLLRS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
prgJ YP_217791.1 cell invasion protein Virulence SPI-1 Protein 2e-40 99
prgJ NP_461793.1 needle complex minor subunit Virulence SPI-1 Protein 2e-40 99
prgJ NP_457266.1 pathogenicity 1 island effector protein Virulence SPI-1 Protein 7e-40 98
prgJ NP_806475.1 pathogenicity island 1 effector protein Virulence SPI-1 Protein 7e-40 98

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
STMMW_28341 YP_005233861.1 pathogenicity 1 island effector protein VFG0534 Protein 4e-41 99