Gene Information

Name : STMMW_27391 (STMMW_27391)
Accession : YP_005233766.1
Strain : Salmonella enterica D23580
Genome accession: NC_016854
Putative virulence/resistance : Unknown
Product : DNA-invertase hin
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2907827 - 2908399 bp
Length : 573 bp
Strand : +
Note : pfam_scan;Pfam:PF02796; E()=6.5E-17;score=60.9;query139-182;description=HTH_7; pfam_scan;Pfam:PF00239; E()=1.4E-51;score=173.7;query 4-136;description=Resolvase; tmhmm; query 1-191

DNA sequence :
ATGGCTACTATTGGGTATATTCGGGTGTCAACAATTGACCAAAATATCGATTTACAGCGTAATGCGCTTACTAGTGCAAA
TTGTGACCGCATTTTTGAGGACCGTATCAGTGGCAAGATTGCAAACCGCCCCGGCCTGAAACGAGCGTTAAAGTATGTAA
ATAAAGGCGATACTCTTGTCGTCTGGAAATTAGACAGACTGGGCCGCAGCGTGAAAAACCTGGTGGCGTTAATATCAGAA
TTACATGAACGTGGAGCTCACTTCCATTCTTTAACCGATAGTATTGATACCAGTAGCGCGATGGGGCGATTCTTTTTTCA
TGTAATGTCAGCACTGGCCGAGATGGAGCGAGAATTAATTGTCGAGCGAACCCTTGCCGGACTGGCTGCCGCCAGAGCGC
AAGGACGACTGGGAGGGCGCCCTCGGGCGATCAACAAACATGAACAGGAACAGATTAGTCGGCTATTAGAGAAAGGCCAT
CCTCGGCAGCAACTAGCTATTATTTTTGGTATTGGCGTATCTACCTTATACAGATATTTTCCGGCAAGCCGCATAAAAAA
ACGAATGAATTAA

Protein sequence :
MATIGYIRVSTIDQNIDLQRNALTSANCDRIFEDRISGKIANRPGLKRALKYVNKGDTLVVWKLDRLGRSVKNLVALISE
LHERGAHFHSLTDSIDTSSAMGRFFFHVMSALAEMERELIVERTLAGLAAARAQGRLGGRPRAINKHEQEQISRLLEKGH
PRQQLAIIFGIGVSTLYRYFPASRIKKRMN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
CDBH8_0918 YP_005160010.1 transposase-like protein Not tested Not named Protein 6e-43 60
tnpR ACD85600.1 TnpR resolvase Not tested SGI2 Protein 9e-31 53
res AGF34985.1 resolvase Not tested SGI1 Protein 9e-31 53
res AGF35025.1 resolvase Not tested SGI1 Protein 9e-31 53
res AGF35059.1 resolvase Not tested SGI1 Protein 9e-31 53
res AGK06929.1 resolvase Not tested SGI1 Protein 9e-31 53
res AGK06966.1 resolvase Not tested SGI1 Protein 9e-31 53
res AGK07012.1 resolvase Not tested SGI1 Protein 9e-31 53
res AGK07070.1 resolvase Not tested SGI1 Protein 9e-31 53
res AAK02044.1 resolvase Not tested SGI1 Protein 9e-31 53
binR YP_254224.1 resolvase/integrase BinR Not tested ¥ðSh1 Protein 5e-32 47
SH1761 YP_253676.1 DNA-invertase Not tested ¥ÕSh1 Protein 1e-32 47
binL YP_254524.1 DNA-invertase Not tested ¥ðSh2 Protein 1e-32 47
ABTW07_3871 YP_005797119.1 resolvase IS26 Not tested AbaR4e Protein 3e-21 46
tnpR ACN81015.1 TnpR resolvase Not tested AbaR5 Protein 3e-21 46
1_318 CAJ77076.1 Resolvase Not tested AbaR1 Protein 2e-21 46