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Name : STMMW_27261 (STMMW_27261) Accession : YP_005233754.1 Strain : Salmonella enterica D23580 Genome accession: NC_016854 Putative virulence/resistance : Unknown Product : PTS system glucose-specific transporter subunit IIBC Function : - COG functional category : - COG ID : - EC number : - Position : 2888844 - 2890385 bp Length : 1542 bp Strand : - Note : pfam_scan;Pfam:PF00367; E()=2.9E-9;score=35.8;query 431-463;description=PTS_EIIB; pfam_scan;Pfam:PF02378; E()=9.6E-79;score=264.3;query 15-344;description=PTS_EIIC; tmhmm; query 1-514 DNA sequence : ATGAAAAGATTCAACCTTCTGCAAATGTTACAAAGCATCGGGCGATCGTTAATGATCCCCATTGCCATGCTGCCTGCCGC CGGTATTTTGCTGGCTTTTGGTGTTAGCTTTCAGGATCCCAATATTGTCGCCAGCCTGCCGTTTCTCGGCACTGACGGGC TGGTTCACGTGCTGAAGCTGATGGCGGAAGCGGGCAGTGCGATTTTCGCCAACCTGCCGCTGCTGTTTGCGGTCGGCGTG GCGGTGGGACTTAGTGACGATCAGGGCATTGCCGGGCTGTCGGCGATCGCCGGGTTTTTGATTATGAACGTCACCATCGG CCAGTTTCTGGGGATCACGCCCGAATCGGTGGCGCAGGTGCGTGACTACACGATGGTGCTGGGCATCCCTTCGCTGCAGA CCGGCGTGTTTGGCGGCATCATTATCGGGATTATCGCCGCCTGGCTGTATAAACGCTATTACCGCATCCAGCTTCCTTCA TGGCTGGAGTTCTTCTCCGGCAAGCGATTTGTGCCGATAGTGACCTCCTTCGCCGCGCTGTTTGTCGGGCTGGTGATGGC GGTGGTCTGGCCGCCGGTTCAGCATCTGATTAATGGCCTGTCGAATACCATGACGGTGCAGGGGCCGGGCGTGTCCGCCT TCCTGTTCGGTTTTGTCGAGCGGCTGCTGATCCCGTTTGGTCTTAACCATGTCTGGTGGCCGACGTTCTGGCTGCAGTTT GGCGAGTACGTGAACAAAGCCGGGCAGGTGGTGCATGGCGACCAGCTTATCTTCTTTGCCCAGTTGAAAGATCAGGTGCC GATTACCGCCGGAACCTTTATGGCCGGGCTGACGCCGATCAAGATGTTCTGTATTCCGGCGATTGCGCTGGCGATCTACC GCTGCGCCAGCCCGGAAAACATAGCGCGTGTGAAGGGCATTATGCTCTCTGGCGCGATCACTTCCATCGTCTGCGGTATC ACCGAGCCGATTGAGTTCTCCTTCCTGTTTGTTGCACCCGTGCTGTATGGCATTCACGCCGTCCTGGCGGGGCTGGTGTT CCTGCTGATGGAGTGGTTCAGCGTGCACATCGGGCTCTCTTTCTCCGGCGGGCTTATCGACTATCTCTTCTTTGGCGTTC TGCCGCGAGCGCCTCACTGGTACATGGTATTCCCGGTCGGGCTGGTGATGGGCGCGGTGTACTACGTCCTGTTTACCTTT GCCATCCGTCGCTGGAATTTGCTGACGCCGGGCCGTGAAGTCGAAGAAACCGCTGTGGCGCAGGAAAGCGAACAGAACGA CCTGGTGAGCGGCATCATTCTGGCCTATGGCGGATTGGGGAATATGACCAGCATCGAAGCCTGCATGTCACGTCTGCGCA TTGACGTGACGGATAAGACGCTGGTGGACAAAGCGCTGCTGAAACAGCTTGGCGCGGCGGGCGTCGTTGAGGTCGGGAAC AACATTCAGAGCGTCTTTGGCATGAAATCCGACCGGCTGAAAGAGGCGATCCGCGCGATTAAAGCGCATCCGGTTTCCGG ACATTGTGAACCCATACACTAA Protein sequence : MKRFNLLQMLQSIGRSLMIPIAMLPAAGILLAFGVSFQDPNIVASLPFLGTDGLVHVLKLMAEAGSAIFANLPLLFAVGV AVGLSDDQGIAGLSAIAGFLIMNVTIGQFLGITPESVAQVRDYTMVLGIPSLQTGVFGGIIIGIIAAWLYKRYYRIQLPS WLEFFSGKRFVPIVTSFAALFVGLVMAVVWPPVQHLINGLSNTMTVQGPGVSAFLFGFVERLLIPFGLNHVWWPTFWLQF GEYVNKAGQVVHGDQLIFFAQLKDQVPITAGTFMAGLTPIKMFCIPAIALAIYRCASPENIARVKGIMLSGAITSIVCGI TEPIEFSFLFVAPVLYGIHAVLAGLVFLLMEWFSVHIGLSFSGGLIDYLFFGVLPRAPHWYMVFPVGLVMGAVYYVLFTF AIRRWNLLTPGREVEETAVAQESEQNDLVSGIILAYGGLGNMTSIEACMSRLRIDVTDKTLVDKALLKQLGAAGVVEVGN NIQSVFGMKSDRLKEAIRAIKAHPVSGHCEPIH |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| APECO1_2642 | YP_859416.1 | PTS system, glucose-specific IIBC component | Not tested | Not named | Protein | 3e-103 | 48 |
