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Name : STMMW_24171 (STMMW_24171) Accession : YP_005233454.1 Strain : Salmonella enterica D23580 Genome accession: NC_016854 Putative virulence/resistance : Unknown Product : phosphoglycerate transport system transcriptional regulatory protein PgtA Function : - COG functional category : - COG ID : - EC number : - Position : 2530927 - 2532174 bp Length : 1248 bp Strand : - Note : pfam_scan;Pfam:PF00158; E()=3.0E-7;score=30.0;query 142-199;description=Sigma54_activat; pfam_scan;Pfam:PF02954; E()=2.2E-12;score=45.9;query366-406;description=HTH_8; pfam_scan;Pfam:PF00072; E()=3.5E-27;score=94.3;query8- 115;description=Response_reg DNA sequence : ATGTTGAATGATGAATGTTCTATTTTGCTGATTGATGATGACGTTGATGTACTTGACGCCTATACCCAAATGCTTGAGCA GGCAGGCTACCGCGTGCGTGGCTTTACCCATCCTTTCGAGGCCAAAGAGTGGGTAAAAGCGGATTGGGAGGGGATCGTTT TGAGCGATGTGTGTATGCCGGGGTGTTCCGGTATCGATCTGATGACGCTGTTTCATCAGGATGACGATCAACTGCCAATC TTATTGATTACCGGACATGGCGATGTACCGATGGCGGTTGATGCGGTGAAAAAGGGCGCCTGGGATTTTCTGCAAAAACC CGTCGATCCGGGCAAGCTGTTGATATTAATTGAAGACGCGCTACGCCAGCGCCGGTCGGTCATTGCACGGCGGCAATATT GCCAGCAGACGTTACAGGTTGAACTGATTGGGCGCAGCGAGTGGATGAATCAGTTTCGACAACGGTTACAACAACTGGCG GAAACGGACATTGCCGTATGGTTTTACGGTGAGCATGGCACTGGACGTATGACTGGCGCCCGTTATCTCCATCAACTGGG GCGTAACGCGAAAGGGCCGTTTGTACGCTATGAACTTACGCCGGAGAATGCCGGGCAGTTGGAGACATTCATCGACCAGG CGCAAGGAGGCACGCTGGTGTTGAGTCATCCCGAATATCTGACACGCGAACAGCAGCACCATCTGGCGCGTTTACAAAGC CTGGAGCATCGGCCTTTTCGTTTGGTGGGCGTTGGCAGCGCTTCGCTGGTGGAGCAGGCGGCAGCTAACCAGATTGCAGC CGAGCTTTACTACTGTTTCGCCATGACCCAAATCGCCTGCCAGTCTCTTTCTCAGCGACCGGATGATATCGAGCCGTTAT TTCGCCATTATCTTCGAAAAGCCTGCCTGCGACTCAATCATCCAGTGCCGGAAATAGCGGGGGAATTACTGAAAGGAATA ATGCGACGCGCCTGGCCAAGCAATGTGCGCGAACTGGCTAATGCGGCAGAGCTTTTTGCTGTTGGCGTGCTGCCGCTGGC GGAAACGGTCAACCCGCAGTTGCTTCTTCAGGAGCCGACCCCGCTTGACCGGCGCGTTGAAGAGTATGAGCGACAAATCA TTACCGAAGCATTAAATATTCATCAGGGACGAATTAATGAAGTGGCGGAGTACCTGCAAATTCCCCGTAAAAAACTTTAT CTGCGCATGAAAAAATATGGTCTAAGTAAAGAGCATTATAAATTCTGA Protein sequence : MLNDECSILLIDDDVDVLDAYTQMLEQAGYRVRGFTHPFEAKEWVKADWEGIVLSDVCMPGCSGIDLMTLFHQDDDQLPI LLITGHGDVPMAVDAVKKGAWDFLQKPVDPGKLLILIEDALRQRRSVIARRQYCQQTLQVELIGRSEWMNQFRQRLQQLA ETDIAVWFYGEHGTGRMTGARYLHQLGRNAKGPFVRYELTPENAGQLETFIDQAQGGTLVLSHPEYLTREQQHHLARLQS LEHRPFRLVGVGSASLVEQAAANQIAAELYYCFAMTQIACQSLSQRPDDIEPLFRHYLRKACLRLNHPVPEIAGELLKGI MRRAWPSNVRELANAAELFAVGVLPLAETVNPQLLLQEPTPLDRRVEEYERQIITEALNIHQGRINEVAEYLQIPRKKLY LRMKKYGLSKEHYKF |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| pgtA | YP_854268.1 | phosphoglycerate activator protein | Not tested | PAI I APEC-O1 | Protein | 4e-157 | 81 |
| pgtA | NP_757052.1 | transport activator | Not tested | PAI II CFT073 | Protein | 4e-157 | 81 |
| pgtA | AAZ04437.1 | phosphoglycerate activator | Not tested | PAI I APEC-O1 | Protein | 3e-157 | 81 |
| pgtA | CAE85165.1 | PgtA protein | Not tested | PAI V 536 | Protein | 6e-157 | 81 |
