Gene Information

Name : STMMW_00211 (STMMW_00211)
Accession : YP_005231108.1
Strain : Salmonella enterica D23580
Genome accession: NC_016854
Putative virulence/resistance : Virulence
Product : fimbrial chaperone
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 25112 - 25798 bp
Length : 687 bp
Strand : +
Note : pfam_scan;Pfam:PF00345; E()=7.9E-40;score=135.3;query 28-147;description=Pili_assembly_N; pfam_scan;Pfam:PF02753; E()=8.8E-15;score=54.2;query153- 222;description=Pili_assembly_C; tmhmm; query 1-229

DNA sequence : 
ATGAAAAAAAACGTACCGATTTTCCTTCGATTATTGCTACTGCTGTCGGCGGCCGGCCTGTCGTTTGCCGCGCAGGCGGG
AGGCATTGCGCTGGGCGCGACCAGGGTGATTTATCCGCAGGGAAGTAAGCAAACCTCCTTGCCGATTATTAATTCTTCTG
CCAGCAATGTTTTTTTAATTCAGTCATGGGTCGCCAATGCCGATGGTTCACGCTCGACGGATTTTATCATTACGCCGCCT
CTCTTTGTGATCCAGCCTAAAAAAGAAAATATATTACGTATTATGTATGTCGGGCCGTCATTACCGACCGATCGCGAAAG
CGTATTTTATTTAAACAGTAAAGCGATACCCTCTGTCGATAAAAATAAATTGACCGGCAACTCCCTGCAAATTGCGACGC
AAAGCGTGATTAAGCTATTTATCCGCCCGAAAAATCTGGCGGAGGCGCCAGCTCATGCCCCGTCGACGCTTCGCTGCCGT
AACGAGCGCGGCCAGCTAACGATTACTAACCCTTCGCCGTACTACGTTTCGATGGTTGAACTGTATAGCGCGGGGAAAAA
ACTGCCGAATACTATGGTACCGCCGAAAGGCGCGATCACTCTCCCGGCGACGCCCGGCCAGGTATCTTTGCGCACGGTAA
ACGATTTTGGCGCAACGACGCCAGCACGCGTTTGTCCAGCTTCATGA

Protein sequence : 
MKKNVPIFLRLLLLLSAAGLSFAAQAGGIALGATRVIYPQGSKQTSLPIINSSASNVFLIQSWVANADGSRSTDFIITPP
LFVIQPKKENILRIMYVGPSLPTDRESVFYLNSKAIPSVDKNKLTGNSLQIATQSVIKLFIRPKNLAEAPAHAPSTLRCR
NERGQLTITNPSPYYVSMVELYSAGKKLPNTMVPPKGAITLPATPGQVSLRTVNDFGATTPARVCPAS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
fim2C AFH78430.1 putative fimbrial chaperone protein Virulence KpGI-5 Protein 8e-45 51
sfaE CAC16952.2 SfaE protein Virulence PAI III 536 Protein 3e-42 49

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
STMMW_00211 YP_005231108.1 fimbrial chaperone VFG0875 Protein 4e-46 52
STMMW_00211 YP_005231108.1 fimbrial chaperone VFG0445 Protein 5e-48 51
STMMW_00211 YP_005231108.1 fimbrial chaperone VFG0911 Protein 2e-42 49
STMMW_00211 YP_005231108.1 fimbrial chaperone VFG1644 Protein 2e-42 49
STMMW_00211 YP_005231108.1 fimbrial chaperone VFG0455 Protein 6e-35 42