Gene Information

Name : STMMW_21501 (STMMW_21501)
Accession : YP_005233186.1
Strain : Salmonella enterica D23580
Genome accession: NC_016854
Putative virulence/resistance : Unknown
Product : putative polysaccharide export protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2225167 - 2226222 bp
Length : 1056 bp
Strand : -
Note : pfam_scan;Pfam:PF02563; E()=3.1E-25;score=87.3;query49- 138;description=Poly_export; pfam_scan;Pfam:PF10531; E()=1.6E-5;score=24.4;query 145-191;description=SLBB

DNA sequence : 
ATGTCTACGATGGGGAAAGATGTGATCAAACAGCAAGACGCTGACTTTGATCTCGACCGGATGGTCAATGTGTATCCGCT
GACGCCACGGTTGGTTGAGCAATTACGCCCGCGGCCCAATGTCGCGCAACCGAATATGTCGCTGGACCAGGAGATCGCCA
GCTATCAGTATCGCGTCGGGCCTGGCGATGTGCTGAATGTCACCGTCTGGGATCACCCGGAATTGACCACGCCAGCAGGC
CAGTACCGTAGCTCAAGCGATACCGGCAACTGGGTACAGCCGGACGGCACCATGTTTTATCCCTACATTGGCAAGGTTAG
CGTCGTCGGTAAAACTTTGTCAGAGATTCGTAGCGATATTACCGGGCGTTTAGCGAAGTACATTGCGGACCCGCAGGTGG
ATGTCAATATCGCCGCTTTCCGCTCGCAAAAAGCGTACATCTCCGGCCAGGTGAATAAATCCGGTCAGCAGGCTATTACT
AACGTACCGCTAACCGTCCTGGATGCGATTAACGCTGCGGGCGGCCTGACCGATATGGCGGACTGGCGCAACGTCGTGTT
GACGCACAACGGCAAAGAACAGCGCATTTCGCTACAGGCGCTGATGCAAAATGGCGATCTTAGCCAGAACCGCTTGCTCT
ACCCTGGCGACATTCTGTATGTGCCGCGCAATGACGATCTGAAAGTCTTTGTCATGGGCGAAGTGAAAAAACAGAGCACC
CTCAAAATGGATTTCAGCGGCATGACGCTCACCGAAGCATTAGGCAATGCGGAAGGCATTGATCTGACCACCTCCAACGC
CAGCGGCATTTTTGTGATTCGTCCGTTGAAAGGCGAGGGGGGACGCGGCGGCAAGATCGCCAATATCTACCAGCTTGATA
TGTCTGACGCCACGTCATTGGTGATGGCGACGGAATTCCGACTTCAGCCTTACGATGTGGTGTACGTCACGACCGCGCCG
GTTGCTCGCTGGAACCGTCTGATCAATCAGTTGCTGCCAACCATTAGCGGTGTCCGTTATATGACGGATACGGCCAGCGA
CATTCATTCCTGGTAA

Protein sequence : 
MSTMGKDVIKQQDADFDLDRMVNVYPLTPRLVEQLRPRPNVAQPNMSLDQEIASYQYRVGPGDVLNVTVWDHPELTTPAG
QYRSSSDTGNWVQPDGTMFYPYIGKVSVVGKTLSEIRSDITGRLAKYIADPQVDVNIAAFRSQKAYISGQVNKSGQQAIT
NVPLTVLDAINAAGGLTDMADWRNVVLTHNGKEQRISLQALMQNGDLSQNRLLYPGDILYVPRNDDLKVFVMGEVKKQST
LKMDFSGMTLTEALGNAEGIDLTTSNASGIFVIRPLKGEGGRGGKIANIYQLDMSDATSLVMATEFRLQPYDVVYVTTAP
VARWNRLINQLLPTISGVRYMTDTASDIHSW

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
orf39 AAO18064.1 Orf39 Not tested TTSS locus Protein 2e-121 67