Gene Information

Name : STMMW_19261 (STMMW_19261)
Accession : YP_005232965.1
Strain : Salmonella enterica D23580
Genome accession: NC_016854
Putative virulence/resistance : Virulence
Product : invasion response-regulator
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2021757 - 2022413 bp
Length : 657 bp
Strand : -
Note : pfam_scan;Pfam:PF00196; E()=8.6E-21;score=72.7;query148-204;description=GerE; pfam_scan;Pfam:PF00072; E()=8.4E-32;score=109.2;query 4-116;description=Response_reg

DNA sequence : 
TTGATCAACGTTCTTCTTGTTGATGACCACGAACTGGTGCGCGCAGGGATACGACGCATTCTTGAAGATATAAAGGGCAT
TAAAGTTGTCGGTGAAGCGTGCTGCGGAGAGGATGCGGTAAAATGGTGCCGTACTAACGCCGTTGACGTCGTGCTGATGG
ATATGAACATGCCCGGTATTGGCGGCCTTGAGGCGACGCGTAAAATTGCCCGCTCGACAGCGGATATCAAAGTGATCATG
CTGACCGTCCATACGGAGAACCCGTTGCCCGCCAAAGTGATGCAGGCTGGCGCAGCTGGCTATCTCAGCAAAGGCGCTGC
GCCTCAGGAGGTGGTGAGCGCTATTCGTTCGGTGTATTCCGGACAACGTTATATCGCCTCCGATATCGCTCAGCAGATGG
CGCTCAGTCAGATTGAGCCTGCAAAAACGGAAACGCCGTTCGCCAGTTTGTCTGAACGCGAGTTGCAGATTATGCTGATG
ATCACCAAGGGTCAGAAGGTCAATGAGATTTCAGAACAGCTGAATCTCAGTCCTAAAACGGTGAACAGCTATCGCTATCG
TATGTTCAGTAAATTAAACATTCATGGTGATGTTGAGCTGACTCACCTGGCAATCCGCCATGGCCTGTGTAATGCGGAGA
CGTTAACAAGCCAGTGA

Protein sequence : 
MINVLLVDDHELVRAGIRRILEDIKGIKVVGEACCGEDAVKWCRTNAVDVVLMDMNMPGIGGLEATRKIARSTADIKVIM
LTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYSGQRYIASDIAQQMALSQIEPAKTETPFASLSERELQIMLM
ITKGQKVNEISEQLNLSPKTVNSYRYRMFSKLNIHGDVELTHLAIRHGLCNAETLTSQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00302 YP_008207767.1 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain Not tested AbaR25 Protein 2e-46 49
BJAB0868_00306 YP_008211632.1 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain Not tested AbaR26 Protein 2e-46 49

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
STMMW_19261 YP_005232965.1 invasion response-regulator VFG1889 Protein 1e-54 51