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Name : STMMW_16861 (STMMW_16861) Accession : YP_005232734.1 Strain : Salmonella enterica D23580 Genome accession: NC_016854 Putative virulence/resistance : Virulence Product : psp operon transcriptional activator PspF Function : - COG functional category : - COG ID : - EC number : - Position : 1775102 - 1776082 bp Length : 981 bp Strand : + Note : pfam_scan;Pfam:PF00158; E()=8.0E-63;score=210.8;query 9-170;description=Sigma54_activat; pfam_scan;Pfam:PF02954; E()=8.8E-5;score=21.8;query 288-323;description=HTH_8 DNA sequence : ATGGCTGAATTTAAAGATAACCTGCTCGGCGAGGCAAACCGTTTTCTTGAAGTACTGGAACAAGTCTCCCGGCTCGCGCC GCTGGATAAGCCAGTGCTGATTATTGGCGAACGCGGGACGGGTAAAGAACTTATCGCCAATCGACTGCATTATCTCTCTT CACGCTGGCAGGGGCCGCTTATCTCGCTTAACTGCGCGGCGCTTAACGAAAATCTGCTGGACTCCGAACTGTTTGGCCAT GAAGCGGGCGCTTTTACCGGGGCGCAAAAACGTCATCCCGGTCGCTTTGAACGCGCCGATGGCGGCACGCTGTTTTTGGA TGAACTGGCGACAGCGCCGATGCTGGTACAGGAAAAGCTGCTGCGGGTGATTGAATATGGCGAGCTAGAGCGCGTCGGCG GCAGCCAGCCGTTACAGGTTAATGTGCGATTAGTATGCGCCACTAATGCCGATTTACCCGCCATGGTGAAGGAAGGGACA TTTCGTGCCGATCTGCTCGACAGGCTGGCTTTTGATGTTGTACAACTGCCGCCGCTGCGCGAACGCCAGAGCGATATCAT GCTGATGGCCGAGCACTTTGCTATTCAGATGTGTCGTGAGCTACGTCTGCCCTTATTTCCCGGTTTTACCGATCGGGCAA AAGAAACGTTGTTGCATTACGCCTGGCCAGGTAATGTCCGCGAGCTGAAAAACGTAGTCGAACGTTCAGTGTATCGCCAC GGCAGTAGTGAACAACCTTTGGATGAAATTGTTATCGATCCTTTTCAACGCCATCCCGCTGAACCGCCCGCGCCCGCCCT GCCAGCGGCATCCGTCACGCCTGACCTGCCGCTCAAATTACGTGAGTTTCAACTGCAACAGGAAAAAGCGCTGCTGCAAC GTAGCTTACAGCAGGCGAAGTTTAACCAGAAACGAGCCGCCGATTTGCTGGCGCTCACCTACCACCAGTTTCGCGCCTTG CTTAAAAAGCATCAGCTTTAG Protein sequence : MAEFKDNLLGEANRFLEVLEQVSRLAPLDKPVLIIGERGTGKELIANRLHYLSSRWQGPLISLNCAALNENLLDSELFGH EAGAFTGAQKRHPGRFERADGGTLFLDELATAPMLVQEKLLRVIEYGELERVGGSQPLQVNVRLVCATNADLPAMVKEGT FRADLLDRLAFDVVQLPPLRERQSDIMLMAEHFAIQMCRELRLPLFPGFTDRAKETLLHYAWPGNVRELKNVVERSVYRH GSSEQPLDEIVIDPFQRHPAEPPAPALPAASVTPDLPLKLREFQLQQEKALLQRSLQQAKFNQKRAADLLALTYHQFRAL LKKHQL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| hrpS | AAT96161.1 | HrpS | Virulence | T-PAI | Protein | 2e-34 | 41 |
| hrpS | AAT96215.1 | HrpS | Virulence | T-PAI | Protein | 2e-34 | 41 |
