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Name : STMMW_14271 (STMMW_14271) Accession : YP_005232481.1 Strain : Salmonella enterica D23580 Genome accession: NC_016854 Putative virulence/resistance : Virulence Product : putative type III secretion protein Function : - COG functional category : - COG ID : - EC number : - Position : 1496943 - 1498001 bp Length : 1059 bp Strand : + Note : pfam_scan;Pfam:PF01312; E()=1.3E-130;score=434.8;query 1-341;description=Bac_export_2; tmhmm; query 1-353 DNA sequence : ATGAGCGAGAAAACAGAACAGCCTACAGAAAAGAAATTACGTGATGGCCGTAAGGAAGGGCAGGTTGTCAAAAGTATTGA AATAACATCATTATTTCAGCTGATTGCGCTTTATTTGTATTTTCATTTCTTTACTGAAAAGATGATTTTGATACTGATTG AGTCAATAACTTTCACATTACAATTAGTAAATAAACCATTTTCTTATGCATTAACGCAATTGAGTCATGCTTTAATAGAG TCACTGACTTCTGCACTGCTGTTTCTGGGCGCTGGGGTAATAGTTGCTACTGTGGGTAGCGTGTTTCTTCAGGTGGGGGT GGTTATTGCCAGCAAGGCCATTGGTTTTAAAAGCGAGCATATAAATCCGGTAAGTAATTTTAAGCAGATATTCTCTTTAC ATAGCGTAGTAGAATTATGTAAATCCAGCCTAAAAGTTATCATGCTATCTCTTATCTTTGCCTTTTTCTTTTATTATTAT GCCAGTACTTTTCGGGCGCTACCGTACTGTGGGTTAGCCTGTGGCGTGCTTGTGGTTTCTTCTTTAATAAAATGGTTATG GGTAGGGGTGATGGTTTTTTATATCGTCGTTGGCATACTGGACTATTCTTTTCAATATTATAAGATTAGAAAAGATCTAA AAATGAGTAAAGATGACGTAAAACAGGAGTATAAAGATCTGGAGGGCGACCCTCAAATGAAGACGCGGCGTCGGGAAATG CAGAGTGAAATACAAAGTGGGAGTTTAGCTCAATCTGTTAAACAATCTGTTGCGGTAGTGCGTAATCCAACGCATATTGC GGTTTGTCTTGGCTATCATCCCACCGATATGCCAATACCACGCGTCCTGGAAAAAGGCAGTGATGCTCAAGCTAACTATA TTGTTAACATCGCTGAACGCAACTGCATCCCCGTTGTTGAAAATGTTGAGCTGGCCCGCTCATTATTTTTTGAAGTGGAA CGCGGAGATAAAATTCCTGAAACGTTATTTGAACCCGTTGCAGCCTTGTTACGTATGGTGATGAAGATAGATTATGCGCA TTCTACCGAAACACCATAA Protein sequence : MSEKTEQPTEKKLRDGRKEGQVVKSIEITSLFQLIALYLYFHFFTEKMILILIESITFTLQLVNKPFSYALTQLSHALIE SLTSALLFLGAGVIVATVGSVFLQVGVVIASKAIGFKSEHINPVSNFKQIFSLHSVVELCKSSLKVIMLSLIFAFFFYYY ASTFRALPYCGLACGVLVVSSLIKWLWVGVMVFYIVVGILDYSFQYYKIRKDLKMSKDDVKQEYKDLEGDPQMKTRRREM QSEIQSGSLAQSVKQSVAVVRNPTHIAVCLGYHPTDMPIPRVLEKGSDAQANYIVNIAERNCIPVVENVELARSLFFEVE RGDKIPETLFEPVAALLRMVMKIDYAHSTETP |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| ssaU | YP_216430.1 | secretion system apparatus protein SsaU | Virulence | SPI-2 | Protein | 5e-156 | 99 |
| ssaU | NP_456106.1 | putative type III secretion protein | Virulence | SPI-2 | Protein | 2e-157 | 99 |
| ssaU | NP_805093.1 | secretion system apparatus protein SsaU | Virulence | SPI-2 | Protein | 2e-157 | 99 |
| ssaU | CAA68202.1 | secretion system apparatus, SsaU | Virulence | SPI-2 | Protein | 6e-158 | 99 |
| ssaU | NP_460387.1 | secretion system apparatus protein SsaU | Virulence | SPI-2 | Protein | 7e-158 | 99 |
| YPO0273 | YP_002345355.1 | secretion system apparatus protein SsaU | Virulence | Not named | Protein | 6e-73 | 49 |
| escU | AFO66307.1 | putative LEE-encoded type III secretion system factor | Virulence | SESS LEE | Protein | 3e-51 | 41 |
| escU | AFO66403.1 | putative LEE-encoded type III secretion system factor | Virulence | SESS LEE | Protein | 3e-51 | 41 |
| unnamed | AAL06357.1 | EscU | Virulence | LEE | Protein | 2e-48 | 41 |
| escU | CAI43886.1 | EscU protein | Virulence | LEE | Protein | 7e-50 | 41 |
| escU | CAC81850.1 | EscU protein | Virulence | LEE II | Protein | 7e-50 | 41 |
| escU | AAK26703.1 | EscU | Virulence | LEE | Protein | 7e-50 | 41 |
| escU | YP_003223487.1 | T3SS structure protein EscU | Virulence | LEE | Protein | 1e-49 | 41 |
| escU | AAL57530.1 | EscU | Virulence | LEE | Protein | 7e-50 | 41 |
| escU | YP_003232141.1 | secretion system apparatus protein SsaU | Virulence | LEE | Protein | 1e-49 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| STMMW_14271 | YP_005232481.1 | putative type III secretion protein | VFG0522 | Protein | 3e-158 | 99 |
