Gene Information

Name : STMMW_14261 (STMMW_14261)
Accession : YP_005232480.1
Strain : Salmonella enterica D23580
Genome accession: NC_016854
Putative virulence/resistance : Virulence
Product : putative type III secretion protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1496167 - 1496946 bp
Length : 780 bp
Strand : +
Note : pfam_scan;Pfam:PF01311; E()=2.8E-76;score=255.7;query 3-251;description=Bac_export_1; tmhmm; query 1-260

DNA sequence :
ATGGCACAACAGGTAAATGAGTGGCTTATTGCATTGGCTGTGGCTTTTATTCGACCATTGAGCCTTTCTTTATTACTTCC
CTTATTAAAAAGTGGCAGTTTAGGGGCCGCACTTTTACGTAATGGCGTGCTTATGTCACTTACCTTTCCGATATTACCAA
TCATTTACCAGCAGAAGATTATGATGCATATTGGTAAAGATTACAGTTGGTTAGGGTTAGTCACTGGAGAGGTGATTATT
GGTTTTTCAATTGGGTTTTGTGCGGCGGTTCCCTTTTGGGCCGTTGATATGGCGGGGTTTCTGCTTGATACTTTACGTGG
CGCGACAATGGGTACGATATTCAATTCTACAATAGAAGCTGAAACCTCACTTTTTGGCTTGCTTTTCAGCCAGTTCTTGT
GTGTTATTTTCTTTATAAGCGGCGGCATGGAGTTTATATTAAACATTCTGTATGAGTCATATCAATATTTACCACCAGGG
CGTACTTTATTATTTGACCAGCAATTTTTAAAATATATCCAGGCAGAGTGGAGAACGCTTTATCAATTATGTATCAGCTT
CTCTCTTCCTGCCATAATATGTATGGTATTAGCCGATCTGGCTTTAGGTCTTTTAAATCGGTCGGCACAACAATTGAATG
TGTTTTTCTTCTCAATGCCGCTCAAAAGTATATTGGTTCTACTGACGCTCCTGATCTCATTCCCTTATGCTCTTCATCAC
TATTTGGTTGAAAGCGATAAATTTTATATTTATCTAAAAGACTGGTTTCCATCTGTATGA

Protein sequence :
MAQQVNEWLIALAVAFIRPLSLSLLLPLLKSGSLGAALLRNGVLMSLTFPILPIIYQQKIMMHIGKDYSWLGLVTGEVII
GFSIGFCAAVPFWAVDMAGFLLDTLRGATMGTIFNSTIEAETSLFGLLFSQFLCVIFFISGGMEFILNILYESYQYLPPG
RTLLFDQQFLKYIQAEWRTLYQLCISFSLPAIICMVLADLALGLLNRSAQQLNVFFFSMPLKSILVLLTLLISFPYALHH
YLVESDKFYIYLKDWFPSV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ssaT NP_460386.1 type III secretion system apparatus protein Virulence SPI-2 Protein 4e-99 100
ssaT CAA68201.1 secretion system apparatus, SsaT Virulence SPI-2 Protein 3e-99 100
ssaT NP_805092.1 type III secretion protein Virulence SPI-2 Protein 6e-98 99
ssaT YP_216429.1 secretion system apparatus protein SsaT Virulence SPI-2 Protein 5e-98 99
ssaT NP_456107.1 putative type III secretion protein Virulence SPI-2 Protein 6e-98 99
YPO0272 YP_002345354.1 type III secretion apparatus protein Virulence Not named Protein 7e-45 52

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
STMMW_14261 YP_005232480.1 putative type III secretion protein VFG0521 Protein 2e-99 100