Gene Information

Name : STMMW_14071 (STMMW_14071)
Accession : YP_005232461.1
Strain : Salmonella enterica D23580
Genome accession: NC_016854
Putative virulence/resistance : Virulence
Product : putative pathogenicity island effector protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1483569 - 1483985 bp
Length : 417 bp
Strand : +
Note : pfam_scan;Pfam:PF09621; E()=4.7E-6;score=25.8;query 3-58;description=LcrR

DNA sequence : 
ATGGTGCAAGAAATAGAGCAATGGTTACGTCGGCATCAGGTGTTTACTGAGCCTGCATATTTAGGGGAGACCGCCATATT
ACTTGGGCAGCAGTTTATATTATCGCCTTACCTGGTGATCTATCGTATTGAGGCAAAAGAAATGATTATTTGTGAGTTCA
GGCGCCTGACGCCCGGGCAACCTCGACCACAGCAATTGTTTCACTTACTGGGACTTTTACGCGGGATATTTGTGCATCAC
CCGCAGTTAACATGTTTAAAGATGTTGATAATCACCGACGTTCTGGATGAAAAAAAAGCCATGCTACGCAGGAAATTATT
GCGCATCCTGACAGTAATGGGAGCGACCTTTACACAGCTTGATGGCGATAACTGGACAGTTTTATCCGCCGAGCATCTTA
TCCAGCGACGTTTTTAA

Protein sequence : 
MVQEIEQWLRRHQVFTEPAYLGETAILLGQQFILSPYLVIYRIEAKEMIICEFRRLTPGQPRPQQLFHLLGLLRGIFVHH
PQLTCLKMLIITDVLDEKKAMLRRKLLRILTVMGATFTQLDGDNWTVLSAEHLIQRRF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
sseE YP_216410.1 secretion system effector SseE Virulence SPI-2 Protein 8e-63 100
sseE NP_460367.1 secreted effector protein Virulence SPI-2 Protein 8e-63 100
sseE AAC28883.1 SseE Virulence SPI-2 Protein 5e-63 100
sseE CAA12189.1 SseE Virulence SPI-2 Protein 5e-63 100
sseE NP_456126.1 putative pathogenicity island effector protein Virulence SPI-2 Protein 1e-62 99
sseE NP_805073.1 pathogenicity island effector protein Virulence SPI-2 Protein 1e-62 99

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
STMMW_14071 YP_005232461.1 putative pathogenicity island effector protein VFG0503 Protein 2e-63 100