Gene Information

Name : STMMW_14011 (STMMW_14011)
Accession : YP_005232455.1
Strain : Salmonella enterica D23580
Genome accession: NC_016854
Putative virulence/resistance : Virulence
Product : type three secretion system protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1479607 - 1479849 bp
Length : 243 bp
Strand : +
Note : pfam_scan;Pfam:PF08988; E()=1.4E-4;score=21.5;query 4-65;description=DUF1895

DNA sequence : 
ATGACAACTTTGACCCGGTTAGAAGATTTGCTGCTTCATTCGCGTGAAGAGGCCAAAGGCATAATTTTACAATTAAGGGC
TGCCCGGAAACAGTTAGAAGAGAACAACGGCAAGTTACAGGATCCGCAGCAATATCAGCAAAACACCTTATTGCTTGAAG
CGATCGAGCAGGCCGAAAATATCATCAACATTATTTATTATCGTTACCATAACAGCGCACTTGTAGTGAGTGAGCAAGAG
TAA

Protein sequence : 
MTTLTRLEDLLLHSREEAKGIILQLRAARKQLEENNGKLQDPQQYQQNTLLLEAIEQAENIINIIYYRYHNSALVVSEQE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ssaE NP_460361.1 secretion system effector Virulence SPI-2 Protein 8e-20 100
ssaE AAC28877.1 putative secretory apparatus component Virulence SPI-2 Protein 6e-20 100
ssaE CAA12183.1 SsaE Virulence SPI-2 Protein 6e-20 100
ssaE NP_456132.1 putative secretion system protein Virulence SPI-2 Protein 2e-19 99
ssaE NP_805067.1 secretion system protein Virulence SPI-2 Protein 2e-19 99
ssaE YP_216404.1 secretion system effector protein SsaE Virulence SPI-2 Protein 2e-19 98

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
STMMW_14011 YP_005232455.1 type three secretion system protein VFG0497 Protein 2e-20 100