Gene Information

Name : KPHS_13090 (KPHS_13090)
Accession : YP_005225609.1
Strain : Klebsiella pneumoniae HS11286
Genome accession: NC_016845
Putative virulence/resistance : Virulence
Product : lysine decarboxylase 1
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1354972 - 1357119 bp
Length : 2148 bp
Strand : +
Note : -

DNA sequence :
ATGAACGTTATTGCAATCATGAATCACATGGGGGTTTACTTCAAAGAAGAACCCATCCGTGAACTGCATCGTGCTCTCGA
ACGCCTGGACTTCCGTATTGTCTACCCGAACGACCGTGACGACTTATTAAAACTTATTGAAAACAACTCTCGTCTGTGCG
GCGTGATCTTCGACTGGGATAAATACAATCTCGAACTGTGCGAAGAAATCAGCAAAATGAACGAGTACATGCCGCTGTAT
GCGTTCGCTAACACCTACTCCACTCTGGACGTTAGCCTGAACGATCTGCGCATGCAGGTTCGCTTCTTCGAATATGCGCT
GGGCGCTGCGGAAGATATCGCGAACAAAATCAAACAGAACACTGACGAATACATCGACACCATTCTGCCGCCGCTGACCA
AAGCGCTGTTCAAATATGTCCGTGAAGGTAAATATACCTTCTGTACCCCAGGCCACATGGGCGGTACCGCGTTCCAGAAA
AGCCCGGTAGGCAGCATCTTCTACGATTTCTTTGGCTCCAACACCATGAAATCCGATATCTCCATTTCGGTTTCTGAACT
GGGTTCCCTGCTGGACCACAGCGGCCCGCACAAAGAAGCGGAAGAGTATATCGCTCGCGTGTTTAACGCAGAACGCAGCT
ACATGGTGACCAACGGTACTTCTACCGCTAACAAAATCGTCGGCATGTACTCCGCGCCGGCCGGCAGCACCGTGCTGATT
GACCGTAACTGCCACAAATCGCTGACTCACCTGATGATGATGAGCGACATTACGCCGATCTACTTCCGTCCGACCCGTAA
CGCCTACGGTATCCTCGGCGGTATTCCGCAGAGCGAATTCCAGCACGCGACTATCGCCAAGCGTGTGAAAGAGACGCCGA
ATGCGACCTGGCCGGTACACGCGGTTATCACCAACTCAACCTATGATGGTCTGCTGTACAACACCGACTTCATCAAGAAA
ACCCTGGATGTGAAATCCATCCACTTTGACTCCGCGTGGGTGCCTTACACCAACTTCTCGCCGATCTATGAAGGCAAATG
CGGGATGAGCGGCGGCCGCGTCGAAGGGAAAGTGATTTATGAAACCCAGTCCACGCACAAACTGCTGGCGGCGTTCTCCC
AGGCGTCGATGATCCATGTGAAAGGCGACGTAAACGAAGAGACCTTCAACGAAGCCTACATGATGCACACCACCACCTCT
CCACACTACGGGATCGTGGCCTCCACCGAAACCGCGGCGGCGATGATGAAGGGGAACGCTGGTAAGCGTCTGATCGACGG
CTCTATTGAACGTTCCATCAAGTTCCGTAAAGAGATCAAACGTCTGAAAGGCGAGTCTGACGGCTGGTTCTTCGACGTCT
GGCAGCCGGAGCATATCGATGGTCCTGAATGCTGGCCGCTGCGTTCCGACAGCGCATGGCACGGTTTCAAAAACATCGAT
AATGAACACATGTACCTCGACCCGATCAAAGTCACGCTGCTGACTCCGGGGATGAAGAAAGACGGCACCATGGATGACTT
CGGTATTCCGGCAAGCATCGTGGCGAAATACCTCGACGAACACGGCATCGTGGTAGAGAAAACCGGTCCGTACAACCTGC
TGTTCCTGTTCAGTATCGGTATCGATAAGACTAAAGCGCTGAGCCTGCTGCGTGCGCTGACCGACTTCAAACGCGCGTTC
GACCTGAACCTGCGGGTGAAAAACATGCTGCCGTCGCTGTACCGTGAAGATCCTGAATTCTATGAAAACATGCGTATTCA
GGACCTCGCGCAGAACATTCACAAACTGATTGAGCATCACAACCTGCCGGATCTGATGTTCCGCGCGTTTGAAGTGCTGC
CATCGATGGTGATGACCCCGTATGCCGCGTTCCAGAAAGAGCTGCACGGTCAGACGGAAGAAGTGTATCTCGAAGAGATG
GTCGGCCGCGTCAACGCCAACATGATCCTGCCGTATCCTCCGGGAGTGCCGCTGGTGATGCCGGGTGAGATGATCACCGA
AGAGAGCCGTCCGGTGCTGGAGTTCCTGCAGATGCTGTGCGAAATCGGCGCCCACTATCCAGGCTTCGAAACCGATATCC
ACGGCGCCTATCGTCAGGCGGATGGTCGTTACACCGTTAAAGTGCTGAAAGAAGAGAATAACAAGTAA

Protein sequence :
MNVIAIMNHMGVYFKEEPIRELHRALERLDFRIVYPNDRDDLLKLIENNSRLCGVIFDWDKYNLELCEEISKMNEYMPLY
AFANTYSTLDVSLNDLRMQVRFFEYALGAAEDIANKIKQNTDEYIDTILPPLTKALFKYVREGKYTFCTPGHMGGTAFQK
SPVGSIFYDFFGSNTMKSDISISVSELGSLLDHSGPHKEAEEYIARVFNAERSYMVTNGTSTANKIVGMYSAPAGSTVLI
DRNCHKSLTHLMMMSDITPIYFRPTRNAYGILGGIPQSEFQHATIAKRVKETPNATWPVHAVITNSTYDGLLYNTDFIKK
TLDVKSIHFDSAWVPYTNFSPIYEGKCGMSGGRVEGKVIYETQSTHKLLAAFSQASMIHVKGDVNEETFNEAYMMHTTTS
PHYGIVASTETAAAMMKGNAGKRLIDGSIERSIKFRKEIKRLKGESDGWFFDVWQPEHIDGPECWPLRSDSAWHGFKNID
NEHMYLDPIKVTLLTPGMKKDGTMDDFGIPASIVAKYLDEHGIVVEKTGPYNLLFLFSIGIDKTKALSLLRALTDFKRAF
DLNLRVKNMLPSLYREDPEFYENMRIQDLAQNIHKLIEHHNLPDLMFRAFEVLPSMVMTPYAAFQKELHGQTEEVYLEEM
VGRVNANMILPYPPGVPLVMPGEMITEESRPVLEFLQMLCEIGAHYPGFETDIHGAYRQADGRYTVKVLKEENNK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cadA NP_756988.1 lysine decarboxylase, inducible Not tested PAI II CFT073 Protein 0.0 95
unnamed CAD66195.1 putative cadaverin decarboxylase Virulence PAI III 536 Protein 0.0 67

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
KPHS_13090 YP_005225609.1 lysine decarboxylase 1 VFG1670 Protein 0.0 67