Gene Information

Name : SFHH103_04017 (SFHH103_04017)
Accession : YP_005220745.1
Strain :
Genome accession: NC_016836
Putative virulence/resistance : Unknown
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 25490 - 25837 bp
Length : 348 bp
Strand : -
Note : -

DNA sequence :
ATGATCCCCTTTGAGAGTGGGGTTAAGGTGTGGCTCGCGACGGGCCATACGGATATGCGGCGCGGCTTCCCCGGCCTTGC
GCTGCAGGTCCAGGAGATTTTGAAGCAAGATCCATTCTGTGGGCATCTGTTTTGCTTTCGAGGCCGCAGGAGCAATCATA
TGAAGGTGATCTGGCACGACGGCCAGGGCAGTTGCACGTTTACAAAAAAGCTGGAGCGGGGGCGGTTCATCTGGCCGACC
GTTGAGGGCGGTGCAGTGACCATCTCTTCTGCGCAACTCTCCTATCTCCTGTCTGGAATAGACTGGCGAAACCCGCAACA
GGCATGGCGGCCGACGAGCGCCGGATAG

Protein sequence :
MIPFESGVKVWLATGHTDMRRGFPGLALQVQEILKQDPFCGHLFCFRGRRSNHMKVIWHDGQGSCTFTKKLERGRFIWPT
VEGGAVTISSAQLSYLLSGIDWRNPQQAWRPTSAG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
l0014 CAD33776.1 L0014 protein Not tested PAI I 536 Protein 2e-21 56
aec52 AAW51735.1 Aec52 Not tested AGI-3 Protein 2e-31 56
unnamed ADD91739.1 hypothetical protein Not tested PAI-I AL862 Protein 2e-31 56
Z5097 NP_290248.1 prophage-associated protein Not tested LEE Protein 2e-28 56
unnamed AAC31493.1 L0014 Not tested LEE Protein 2e-28 56
ECs4546 NP_312573.1 hypothetical protein Not tested LEE Protein 2e-28 56
hp4 AAC61716.1 Hp4 Not tested PAI I CFT073 Protein 2e-28 56
c3561 NP_755436.1 hypothetical protein Not tested PAI I CFT073 Protein 1e-28 56
unnamed AAL99258.1 unknown Not tested LEE Protein 2e-28 56
ECUMN_3327 YP_002414007.1 putative transposase ORF2, IS66 family Not tested Not named Protein 1e-28 56
unnamed ACU09438.1 IS66 family element orf2 Not tested LEE Protein 2e-28 56
c3578 NP_755453.1 hypothetical protein Not tested PAI I CFT073 Protein 2e-28 56
Z4336 NP_289561.1 hypothetical protein Not tested OI-122 Protein 2e-28 56
pB171ORF50 CAD66190.1 ORF50 protein of pB171 Not tested PAI III 536 Protein 4e-31 55
unnamed AAL08461.1 unknown Not tested SRL Protein 3e-28 55
Z1132 NP_286667.1 hypothetical protein Not tested TAI Protein 2e-27 55
Z1571 NP_287075.1 hypothetical protein Not tested TAI Protein 2e-27 55
Z1160 NP_286695.1 hypothetical protein Not tested TAI Protein 1e-29 52
Z1599 NP_287103.1 hypothetical protein Not tested TAI Protein 1e-29 52
BCAM0247 YP_002232879.1 putative transposase Not tested BcenGI11 Protein 2e-24 51
ECO103_3553 YP_003223420.1 hypothetical protein Not tested LEE Protein 7e-27 51
Z4316 NP_289542.1 hypothetical protein Not tested OI-122 Protein 7e-27 51
ECO103_3567 YP_003223430.1 hypothetical protein Not tested LEE Protein 3e-28 51
Z4338 NP_289563.1 hypothetical protein Not tested OI-122 Protein 3e-28 51
ECUMN_3364 YP_002414037.1 putative transposase ORF2, IS66 family Not tested Not named Protein 2e-29 50

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SFHH103_04017 YP_005220745.1 hypothetical protein VFG1517 Protein 8e-22 56
SFHH103_04017 YP_005220745.1 hypothetical protein VFG1709 Protein 7e-29 56
SFHH103_04017 YP_005220745.1 hypothetical protein VFG0792 Protein 7e-29 56
SFHH103_04017 YP_005220745.1 hypothetical protein VFG1698 Protein 4e-29 56
SFHH103_04017 YP_005220745.1 hypothetical protein VFG1665 Protein 2e-31 55
SFHH103_04017 YP_005220745.1 hypothetical protein VFG1052 Protein 1e-28 55
SFHH103_04017 YP_005220745.1 hypothetical protein VFG1737 Protein 6e-30 50