Gene Information

Name : Rahaq2_4921 (Rahaq2_4921)
Accession : YP_005220646.1
Strain :
Genome accession: NC_016835
Putative virulence/resistance : Resistance
Product : arsenical pump membrane protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 383731 - 385020 bp
Length : 1290 bp
Strand : -
Note : PFAM: Arsenical pump membrane protein; TIGRFAM: arsenical pump membrane protein

DNA sequence : 
ATGTGGCTGGCAGGTACTATTTTTTTGCTCACCCTGATTCTGGTTATCTGGCAGCCCCGCGGGCTGGGCATTGGCTGGGG
CGCCATGCTGGGCGCAGGTCTGGCATTACTGACAGGCGTCGTTCACCCAAGTGATATTCCTGTTGTCTGGCAAATAGTCT
GGAATGCAACGGCCACTTTTATTGCCGTTATCATTATCAGCCTGCTGCTGGATGAATCGGGTTTCTTCGAGTGGGCGGCA
CTGCATGTTGCACGCTGGGGAAACGGACGCGGGCGTCTGTTATTTACCTGGATTATTTTGCTGGGCGCAATGGTCGCTGC
GCTGTTCGCCAATGACGGTGCCGCACTGATTCTGACGCCGATTGTCATGGCGATGCTGCTGGCTCTGGGTTTCAGTCGCG
GCGCGACATTAGCCTTTGTCATGGCCGCCGGTTTTATCGCGGATGTTGCCAGCCTGCCGCTGATCGTCTCAAATCTGGTG
AATATCGTTTCGGCTGATTTCTTTAATCTGGGATTCACGGAATATGCAGCCGTCATGGGGCCGGTTAATCTGGCGGCCAT
TGCGACAACACTGGTCATGCTGCACCTGTTTTTCCGCCAAGACATTCCCCCGGTTTACGATATTTCTCTGTTAAAACGGC
CTGAAGAGGCGATCCGCGATGCCGGCACCTTCAAAGCTGGCTGGCTGGTTCTGATCCTTCTGCTGGCAGGTTTCTTTGGT
CTTGAACCCCTCGGCGTACCGGTCAGCCTGGTTGCCGCCATCGGCGCACTGATTCTTTACGTTATCGCCAGGAAAGGTCA
CGCCATTAATACCGGTAAAGTGCTGCGCGGAGCACCGTGGCAAATCGTTATCTTCTCGCTGGGTATGTATCTGGTGGTTT
ATGGTTTACGTAATGCGGGGCTGACGCACACCCTTTCTGCCCTGCTGAATCAGCTGGCAGAGCAGGGTTTATGGGCCTCT
ACGCTGGGGACCGGGTTCCTCACCGCCTTCCTCTCTTCCATCATGAACAATATGCCGACCGTTCTGATCGGCGCGTTGTC
GATTGAGGGCAGCTCAGCCACGGGCGTCATCAGGGAGGCGATGATTTATGCCAACGTGATCGGCAGCGATCTGGGGCCCA
AAATCACCCCGATTGGCAGCCTGGCAACACTGTTATGGTTGCATGTGTTGTCACAGAAGAATATGACGATTACCTGGGGA
TATTACTTCCGTGTGGGCATTGTCATGACCCTTCCGGTGCTGTTTGTCACGCTGGCAGCTTTAGCACTGCGGTTGTCTGT
CGTGCTGTAA

Protein sequence : 
MWLAGTIFLLTLILVIWQPRGLGIGWGAMLGAGLALLTGVVHPSDIPVVWQIVWNATATFIAVIIISLLLDESGFFEWAA
LHVARWGNGRGRLLFTWIILLGAMVAALFANDGAALILTPIVMAMLLALGFSRGATLAFVMAAGFIADVASLPLIVSNLV
NIVSADFFNLGFTEYAAVMGPVNLAAIATTLVMLHLFFRQDIPPVYDISLLKRPEEAIRDAGTFKAGWLVLILLLAGFFG
LEPLGVPVSLVAAIGALILYVIARKGHAINTGKVLRGAPWQIVIFSLGMYLVVYGLRNAGLTHTLSALLNQLAEQGLWAS
TLGTGFLTAFLSSIMNNMPTVLIGALSIEGSSATGVIREAMIYANVIGSDLGPKITPIGSLATLLWLHVLSQKNMTITWG
YYFRVGIVMTLPVLFVTLAALALRLSVVL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
arsB2 YP_001007633.1 arsenical pump membrane protein Not tested YAPI Protein 2e-152 82
arsB YP_252017.1 arsenical pump membrane protein Not tested SCCmec Protein 1e-103 59
arsB YP_005754065.1 arsenical pump membrane protein Not tested Type-XI SCCmec Protein 1e-100 58
SH0109 YP_252024.1 arsenical pump membrane protein Not tested SCCmec Protein 2e-105 58

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Rahaq2_4921 YP_005220646.1 arsenical pump membrane protein BAC0578 Protein 2e-154 84
Rahaq2_4921 YP_005220646.1 arsenical pump membrane protein BAC0576 Protein 3e-153 84
Rahaq2_4921 YP_005220646.1 arsenical pump membrane protein BAC0031 Protein 1e-146 82
Rahaq2_4921 YP_005220646.1 arsenical pump membrane protein BAC0577 Protein 5e-153 82
Rahaq2_4921 YP_005220646.1 arsenical pump membrane protein BAC0574 Protein 2e-103 59
Rahaq2_4921 YP_005220646.1 arsenical pump membrane protein BAC0575 Protein 2e-106 59