Gene Information

Name : Rahaq2_4891 (Rahaq2_4891)
Accession : YP_005220616.1
Strain :
Genome accession: NC_016835
Putative virulence/resistance : Virulence
Product : Mn/Zn ABC transporter ATPase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 346748 - 347527 bp
Length : 780 bp
Strand : +
Note : PFAM: ABC transporter

DNA sequence : 
ATGAATGACACCGCGCTGGATCTCAATGTTGATGATATTTCGGTGACCTACAACAACGGGCATACCGCGATTGAAAATGC
CTCGTTCACGCTGCGAGGCGGCTCAATTTGTGCGCTGCTGGGCGTGAATGGCAGCGGTAAATCCACGCTGTTTAAAACCA
TCATGGGGATGATCCGCCCGACGCACGGGCGAGTGACGCTTGATGGTCTCAATGTGGCCAAAGCGCTGAAACAAAACCTG
ATCGCGTATGTGCCGCAATCCGAAGAAGTGGACTGGAATTTCCCGGTGCTGGTGCGTGATGTGGTGATGATGGGGCGCTA
TGGCAAAATGTCGTTTCTGCGTATTCCTTCACAGGAAGATAAAAAACAGGTCGCTTCGGCGCTGGCGCGTGTCGGGCTGA
CGGAACTGGCCCACCGCCAGATTGGCGAGCTTTCCGGCGGTCAGAAAAAACGCGTTTTCCTCGCGCGGGCACTGGCACAA
CAGGGGCGGGTGATGTTGCTTGATGAACCGTTTACCGGGGTGGATATCAAAACTGAAAACGCCATTATCGAATTGTTGCG
GCAACTGCGCGAGGAAGGGCATCTGATTCTGGTGTCGACGCACAACATCGCCAGCGTGCCCGATTTCTGCGACCGTGTGG
TGCTGATCAACCGCACGGTAATAGCTTCCGGTCCGCTGGAAACCACCTTTACGCATCAGAATCTCGAAAGTACCTTCGGC
GGCGCGCTGCGCAACATCGGTTATTTAATGCCCCAGGAACCGGTAAGGCGGGTGGTATGA

Protein sequence : 
MNDTALDLNVDDISVTYNNGHTAIENASFTLRGGSICALLGVNGSGKSTLFKTIMGMIRPTHGRVTLDGLNVAKALKQNL
IAYVPQSEEVDWNFPVLVRDVVMMGRYGKMSFLRIPSQEDKKQVASALARVGLTELAHRQIGELSGGQKKRVFLARALAQ
QGRVMLLDEPFTGVDIKTENAIIELLRQLREEGHLILVSTHNIASVPDFCDRVVLINRTVIASGPLETTFTHQNLESTFG
GALRNIGYLMPQEPVRRVV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
sitB YP_217782.1 iron transporter: fur regulated Virulence SPI-1 Protein 6e-75 66
sitB NP_461783.1 ATP-binding protein Virulence SPI-1 Protein 3e-75 66
sitB AAD41066.1 SitB Virulence centisome 63 pathogenicity island Protein 2e-75 66
sitB NP_457256.1 Iron transport protein, ATP-binding component Virulence SPI-1 Protein 4e-74 65
sitB NP_806465.1 iron ABC transporter ATP-binding protein Virulence SPI-1 Protein 4e-74 65

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Rahaq2_4891 YP_005220616.1 Mn/Zn ABC transporter ATPase BAC0440 Protein 7e-90 74
Rahaq2_4891 YP_005220616.1 Mn/Zn ABC transporter ATPase BAC0350 Protein 1e-75 66
Rahaq2_4891 YP_005220616.1 Mn/Zn ABC transporter ATPase BAC0400 Protein 8e-43 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Rahaq2_4891 YP_005220616.1 Mn/Zn ABC transporter ATPase VFG0526 Protein 1e-75 66