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Name : Rahaq2_4877 (Rahaq2_4877) Accession : YP_005220602.1 Strain : Genome accession: NC_016835 Putative virulence/resistance : Virulence Product : type VI secretion ATPase, ClpV1 family Function : - COG functional category : - COG ID : - EC number : - Position : 331740 - 334310 bp Length : 2571 bp Strand : + Note : PFAM: AAA domain (Cdc48 subfamily); C-terminal, D2-small domain, of ClpB protein; Clp amino terminal domain; ATPase family associated with various cellular activities (AAA); TIGRFAM: type VI secretion ATPase, ClpV1 family DNA sequence : ATGGGTAACTACCTGAAGCAAATTGTTGAGAAAATGAATGTCGAAGCGCGCGAGTGTCTTGACGCCGCGATCAGCCTGGC CGTCAGCCGTACGCATCACGAAGTAGACGTCGAGCATTTACTGCTTGCCCTGATGACCCGCAACCCTGCGCTGATTGAGC AACTCTGTCTGAGTGCTGGCTTGCGGGGCGATACATTGATTGATGCGCTGAAAATCAGCCTCAATCACCTGCGTAGCGGC AACACCCGCAGCCCGGTATTGTCTGAATTGCTGGTCGAACATCTGGAGAAATCCTGGCTGCACGCCAGTGCCTGCTGGCA GCAAACACAACTGCCTGTACAGGCCTTTCTGGGCAGCCTGATTGCCAGTGAAAAAGACAATCAGATCCATCTGTCATCAG CCTTACAGCAGGCGCTGCTGTGTCAGACCGATCGCGCTGACCGGTTGTTGCACGATGCCTGCGCACCAGCACAGGCCACG AATCATCCTGCTGCAACCCGCCACAATACTGATTCTGCGGTGATGAAATTTACCCGTAACCTGACTGAACAGGCGCGTAA TGCGTCACTGGATCCTGCGCTGGGGCGCGAGCAGGAAATACGTCAGCTGATCGACGTGCTGTTGCGCCGCCGTCAGAACA ATCCGGTGCTGACCGGTGAGCCGGGCGTGGGGAAAACTGCGCTGGTTGAAGGGCTGGCACAACGTATTGCGGATGGCACC GTACCGCAAGCGTTGAAGACGATGGAGATTTTGTCGCTGGATATGGGGTTGCTTCAGGCCGGCGCCAGCGTGAAAGGGGA ATTTGAAAACCGTCTGCAAACCCTGCTGCGTGAAGTAAAAGAATACCCGTCTCCGGTTATTCTGTTCATTGATGAGGCGC ATACGCTGATTGGTGCGGGCGGTCAGGCAGGTCAGAACGATGCCGCTAACCTGCTTAAACCGGCGCTGGCGCGAGGAGAA ATGCGCGTGGTGGCAGCGACCACCTGGGCAGAATACAAAAAATACTTTGAGAAGGATGCCGCTCTGGCACGCCGTTTTCA GGTGATCAAAGTGGCGGAGCCTGACGAAGAGAGCGCCACCGCCATGCTGCGTTCACTGAAACCTGCCCTCAGCAAACATC ATGGCGTGCAGATCCTCGAAAGTGCGCTGGTGGCCGCTGTGCGTCTCTCCAGCCGCTATATTTCTGGCCGCCAGTTGCCG GATAAATCCATTAGCCTGCTGGATACCGCCTGCGCCCGTGTGGCGATTTCACAATGTCATGAGCCCAAAGAGATCGAAGA TCTCAATGCGATGATCGCCAACATCCACACTGAACGGGAAAGTTTACTGAAAGAGGGCGATAACCTCTCACGGGTTAAAT GGCTCGATCAACGTGAAAGCGAACTGATGCAAAGTTTAGAAGCACTGCTGCCGCTCTGGCGTCAGCAACAGCAGATTGTG GCGCAGATTAATCGTACTGAGGATGTCGCGCAGATTGCCGCTTTACGTCTGCAACTTGCTGAGATGCATAAAGAACAGGC GATGGTGTATGACTGTGTGGATGCAACCTGTGTGGCGGATGTGGTGGCTGGATGGACCGGTATTCCTCTGGGCCGGATGA TGGAAAAAGAGCAGCAACAACTCGGTGATCTGGTCGCTCGTCTGGAAAGCCGGGTGATCGGGCAATCCCATGCACTAGCG GACATTGCGCAGCAAATCCGCATCGGACGCGCCAATCTTGCGGATCCGGTTAAACCGACCGGCGTCTTTATGCTGGCCGG GCCTTCCGGCGTCGGGAAAACAGAAACCGCGCTGGCCTTGTCTGAGCTGCTTTTCGGCGGCGAACAAAGTCTAATTACCA TCAATATGTCCGAATATCAGGAAGCCCATTCCGTGTCCGGCCTGAAAGGCTCTCCGCCTGGGTACGTGGGTTACGGGCAG GGCGGTGTGCTGACCGAGGCGGTGCGCCGTCGTCCGTACAGCGTCGTCCTGCTCGATGAAATTGAGAAAGCCCATCCGGA TGTGATGGAAATTTTTTATCAGGTATTTGACAAAGGTGTGATGGAAGACGCCGAAGGCCAGCTGATTAATTTCCGCAACA CCCTGATTATTCTGACCAGTAATCTGGCCAGCGATCGGGTGATGACCGCCTGCGCCTCAGGAAACACTGATCAGAAATCA CTGACGGCGCTTCTGCGGCCTGAATTCGATCAATTTTTCCGTCCGGCGCTAATGGGACGGTTGCAACTGATCCCTTATCT GCCCGTCGTGGGCGAAACACTGGCCAAAATCATCCGTCTCAAAATCGATAAAGTGTGCAAACGCTTTAGCGGTGCTGGTG AAGGTCATTCCTCACTGAGCTACAGCGAAAAAGTGGTGGAGTTCATTGCCAGCCGCTGTGAGGTTGAGCAAAGCGGAGCC CGCGAAATTGATGCCGTACTGAATCGGGAATTACTGCCATTACTGACTGACCGTTTACTGGCGCTGGAAAACAAAACCGC TATTCGCCTGCAGCTTGGGGTCAGTAAAGGTCAGCTTACGTTGATCAAACAGCCTGCCGCGAAAAACTCAGTGGCTAAAC AATCCGTCTGA Protein sequence : MGNYLKQIVEKMNVEARECLDAAISLAVSRTHHEVDVEHLLLALMTRNPALIEQLCLSAGLRGDTLIDALKISLNHLRSG NTRSPVLSELLVEHLEKSWLHASACWQQTQLPVQAFLGSLIASEKDNQIHLSSALQQALLCQTDRADRLLHDACAPAQAT NHPAATRHNTDSAVMKFTRNLTEQARNASLDPALGREQEIRQLIDVLLRRRQNNPVLTGEPGVGKTALVEGLAQRIADGT VPQALKTMEILSLDMGLLQAGASVKGEFENRLQTLLREVKEYPSPVILFIDEAHTLIGAGGQAGQNDAANLLKPALARGE MRVVAATTWAEYKKYFEKDAALARRFQVIKVAEPDEESATAMLRSLKPALSKHHGVQILESALVAAVRLSSRYISGRQLP DKSISLLDTACARVAISQCHEPKEIEDLNAMIANIHTERESLLKEGDNLSRVKWLDQRESELMQSLEALLPLWRQQQQIV AQINRTEDVAQIAALRLQLAEMHKEQAMVYDCVDATCVADVVAGWTGIPLGRMMEKEQQQLGDLVARLESRVIGQSHALA DIAQQIRIGRANLADPVKPTGVFMLAGPSGVGKTETALALSELLFGGEQSLITINMSEYQEAHSVSGLKGSPPGYVGYGQ GGVLTEAVRRRPYSVVLLDEIEKAHPDVMEIFYQVFDKGVMEDAEGQLINFRNTLIILTSNLASDRVMTACASGNTDQKS LTALLRPEFDQFFRPALMGRLQLIPYLPVVGETLAKIIRLKIDKVCKRFSGAGEGHSSLSYSEKVVEFIASRCEVEQSGA REIDAVLNRELLPLLTDRLLALENKTAIRLQLGVSKGQLTLIKQPAAKNSVAKQSV |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| STY0294 | NP_454876.1 | ClpB-like protein | Not tested | SPI-6 | Protein | 5e-133 | 52 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Rahaq2_4877 | YP_005220602.1 | type VI secretion ATPase, ClpV1 family | VFG2076 | Protein | 3e-147 | 47 |
| Rahaq2_4877 | YP_005220602.1 | type VI secretion ATPase, ClpV1 family | VFG2084 | Protein | 8e-129 | 43 |
| Rahaq2_4877 | YP_005220602.1 | type VI secretion ATPase, ClpV1 family | VFG0079 | Protein | 1e-102 | 42 |
