Gene Information

Name : Rahaq2_4814 (Rahaq2_4814)
Accession : YP_005220541.1
Strain :
Genome accession: NC_016835
Putative virulence/resistance : Virulence
Product : cobalamin/Fe3+-siderophore ABC transporter ATPase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 260711 - 261478 bp
Length : 768 bp
Strand : +
Note : PFAM: ABC transporter

DNA sequence :

ATGCAACTCAGTGCAGAAAATCTGACTGCCGGATACGGCAATAAAAATATCCTTAATGGCCTGTCGCTGACGCTACCCGC
CGGGAAAATTACCGCGCTGATCGGCCCGAACGGCTGCGGAAAATCCACGCTGCTGAAATGCTTTTCACGTTTGCTGACAC
CGGCTTGCGGTACGTTGCGTCTCGGTGATGATGATTTATCTACGCTGCATGGCCGCCCTCTCGCCCGCAAACTGGCGTTA
CTGCCGCAGCAGCATATTGCGCCGGAAGGTATCAGCGTGCGTGAACTGGTGGGCTATGGCCGCAGCCCGTGGCTGAACCT
GTGGGGCAGGCTGGGGCAGCAGGATAAGACCATCGTCGAACGGGCGATGCAGGAAACCAATATCACAGAACTGGCAGAGA
AACGCGTCAGTGAACTCTCCGGCGGGCAGCGTCAGCGGGTGTTTCTGGCGATGGTGCTGGCGCAGGATACGCCGCTGGTG
CTGCTCGACGAGCCGACCACCTACCTCGATATCAGCCATCAGGTCGAGCTGATGAGCCTGTTGCGCAGTCAGAATCAGCA
GGGGAAAACGCTGGTGGCGGTGCTCCATGATCTGAATCAGGCCAGCCGTTATTGTGATTATCTGGTGATGATGGCAGCGG
GAAAAATTATCGCGCAGGGCACACCGGAAGAGGTGATGACACCCGAATTGCTGGCACAGGTGTTTGATATTGATGCGCAA
ATCTATCCGGAACCGGTAACGGGTAAACCGATGTGTATCGTGCGGTGA

Protein sequence :

MQLSAENLTAGYGNKNILNGLSLTLPAGKITALIGPNGCGKSTLLKCFSRLLTPACGTLRLGDDDLSTLHGRPLARKLAL
LPQQHIAPEGISVRELVGYGRSPWLNLWGRLGQQDKTIVERAMQETNITELAEKRVSELSGGQRQRVFLAMVLAQDTPLV
LLDEPTTYLDISHQVELMSLLRSQNQQGKTLVAVLHDLNQASRYCDYLVMMAAGKIIAQGTPEEVMTPELLAQVFDIDAQ
IYPEPVTGKPMCIVR

• Homologs from PAI DB

Gene	GenBank Accn	Product	Virulance or Resistance	PAI or REI	Alignment Type	E-val	Identity
fecE	AAL08451.1	ATP-binding protein FecE	Virulence	SRL	Protein	3e-88	67
fagC	YP_003782430.1	ABC transporter ATP-binding protein	Not tested	PiCp 1	Protein	1e-57	51
fagC	YP_005682397.1	ATP binding cytoplasmic membrane protein	Virulence	PiCp 1	Protein	1e-57	51
fagC	YP_005684488.1	ATP binding cytoplasmic membrane protein	Not tested	PiCp 1	Protein	1e-57	51
fagC	YP_005680307.1	ATP binding cytoplasmic membrane protein	Not tested	PiCp 1	Protein	1e-57	51
iusE	YP_005143742.1	iron ABC transporter ATP-binding protein	Virulence	Not named	Protein	7e-53	47
SPN23F_09560	YP_002510939.1	ferric siderophore ABC transporter ATP-binding protein	Virulence	PPI-1	Protein	3e-52	46
SP_1035	NP_345510.1	iron-compound ABC transporter ATP-binding protein	Not tested	PPI-1	Protein	3e-52	46
ciuD	YP_005681255.1	Iron ABC transporter ATP-binding protein	Virulence	PiCp 4	Protein	6e-53	44
ciuD	YP_005683346.1	Iron ABC transporter ATP-binding protein	Virulence	PiCp 4	Protein	6e-53	44
ciuD	YP_003783391.1	iron ABC transporter ATP-binding protein	Virulence	PiCp 4	Protein	6e-53	44
ciuD	YP_005685432.1	Iron ABC transporter ATP-binding protein	Virulence	PiCp 4	Protein	6e-53	44
DIP0585	NP_938961.1	iron ABC transporter ATP-binding protein	Virulence	Not named	Protein	4e-51	44

• Homologs from CARD and BacMet (resistance genes)

Gene	GenBank Accn	Product	ID of source DB	Alignment Type	E-val	Identity
Rahaq2_4814	YP_005220541.1	cobalamin/Fe3+-siderophore ABC transporter ATPase	BAC0164	Protein	2e-88	67

• Homologs from VFDB (virulence genes)

Gene	GenBank Accn	Product	ID of source DB	Alignment Type	E-val	Identity
Rahaq2_4814	YP_005220541.1	cobalamin/Fe3+-siderophore ABC transporter ATPase	VFG1042	Protein	2e-88	67
Rahaq2_4814	YP_005220541.1	cobalamin/Fe3+-siderophore ABC transporter ATPase	VFG0925	Protein	6e-55	48