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Name : Rahaq2_4794 (Rahaq2_4794) Accession : YP_005220523.1 Strain : Genome accession: NC_016835 Putative virulence/resistance : Virulence Product : RHS repeat-associated core domain-containing protein Function : - COG functional category : - COG ID : - EC number : - Position : 242642 - 245575 bp Length : 2934 bp Strand : + Note : TIGRFAM: RHS repeat-associated core domain DNA sequence : ATGAGCACATCGCTGTTTAGCCAAACCCCGTGGGTAAATGTTACCGACAATCGTGGCCTGACCGTACGTAGTATCACGTA CTACCGTCATCCGGATTCACCGCAAGCGACAGACGAACGTACCACTTTTTATCAGTACAATGCGTGCGGATTTCTCAAGC ACAGTGCCGACCCACGTCTGCAAGGTGCCGGTCTGGTTAACATCAGGCGTCAGACGGATCTGGCTGGCAGGTTGCTACAC AAACAAAGCACAGATGCCGGGACTACCGTCTGCCTGGATGACGCTGCCGGACGGCCATTTATAACGATCAGTAACATCAG AACCGCTGACGACGGCACGCAGGACATAAGTCAGGCAGTGAGCCGCACCTTTGTGTATGAGGACGCCACTTTGCCGGGAC GTCCGCTCAGCATGACGGAGCAGGTTAACGGCGAAGCCGCCTGCATATCAGATCGCTTCGTGTATGCGGGAAATACGGAT GCTGAGCGGGCGCTGAATCTTGCCGGTCAGTGCATCAGTCACTACGACACTGCGGGTTTGATTCAGACAGACAGTATTGC CCTAACCCGTGTGCCGCTGTCCGTCACCCGCCGTTTGCTGAAGGACGCGAATAACCCGGATACCGTGGCTGACTGGCAAG GGCAAGATGCATCCGTATGGAATGACCTCCTCGCCAGTGAAGCCTATAACATGCTGACTGCCACTGATGCCACCGGGATG ACACTCACTACCACAGATGCACAGGATAATGTGCAGCGCGTGGCCTATGATGTGGCTGGCCGTCAGACCGGCAGTTGGCT GAGGCTCAGGGGCGCAAATGAGCAGGTTATCGTGAAGTCCCTGACGTACTCCGCTGCCGGGCAGAAGCTGCGGGAGGAGC ACGGGAATGGCGTGGTGACAACTTACCAATACGAGCCTGAAACACAGCGCCTGATCGGAATTAAAACGGAGCGCCCGGCC GGACATGCATCCGGCGCGAAAGTGCTGCAGGATTTGCGCTATGAGTATGACCCGGTGGGCAATGTGCTTAGCATCCGCAA TGACGCCGAAGAAACCCGCTTCTGGCGTAATCAGAAAGTGGTGCCGGAGAACACATACACTTACGACAGCCTTTACCAGC TCGTCAGCGGCACCGGGCGCGAAATGGCGAATGCCGGGCAGCAGGGCAGCAGCCTGCGATCTCCCAACGTTCCTCTTCCC ACAGACAGTTCTGCTTATACGACCTACACCCGCACATATACCTACGATAATGCTGGCAACCTGACGCTGATACGCCATAG CGCTCCCGCTACAAACAACAACTACACGCAGGCCATCACCGTCAGCGACCGCAGTAACCGGGGCGTATCAGGCACACTTG CAGAAATTCCGTCTCAGGTAGACGCCTCGTTCACTGCAGGTGGACAGCAGAAATATCTCCAGCCTGGCCAGCGGCTTAGC TGGACGGCACGTAACGAGTTACTTCAGGTGACCCTGGTCGCGCGTGAGGGTGATGCAGATGACCGGGAGTGTTACCGCTA TGATACCAGCAGCCAGCGAATACTGAAGGTCGTTGAGCAAAAAGCCAATAATATTATGCAGATGAGGCAGGTTATTTACC TGCCGGGACTGGAGCTGAGAACAACAAACAGCGGCGGAATGCAAACAGAAAACCTGCAGGTTATTTGCCTGGGAGAAGCG GGCCGGGCGCAGGTACGGATAATGCACTGGGTTGAAGGTAAACCGGCGGATCTCGCTAATGATCAGATACGTTACAGCTA TGACAATCTCAACGGCAGTAGCGTACTTGAGCTGGACGGTGCCGGCAATATTATCAGCGCGGAGGAGTATTACCCCTACG GTGGCACTGCGGTGTGGTCAGCACGCAGTCAGGTTGAGGCGAATTACAAAACCCTGCGTTACTCGGGTAAAGAGCGGGAT GCGAGCGGCCTGTACTACTACGGATACCGTTATTATCAACCCTGGGTAGGTCGGTGGCTGAGTGTGGATCCCGCGGGCAC GATTGATGGCCTTAATATGTTCAGGATGTGCAGGAATAATCCTGTCACATTGACTGACTATGATGGTCTCGCGCCACATC CGCGTACCCGGCTCGGTGAAGGTCCTCTCTATGAACCCAAATTAAGTACAGGAAAAGACAGAGACTTGCCCGGTGCTTTA CCTGTGATTTCTGCTACACCGGTTAGCGCGGAAGTCACAGGAACTCCCATAAAATTAGGGGATGTTTTAAACGATGAGGT AATGAAATCTATTCCCTTATTAACGGACCTTATTAATCCAGCGAAGATGGACATGGATGATGCTACGAAAAAAATCCTCA CTCACCCGGATAGAATTGGGGATATCCTTGCATTTAGTGCAATTCATATTTCTGTAAATGAAAATGATAATATTCATGCA TTAAGAATTGTTGATTCAAAAACATCTGATTATCAAAAGAGAGCAGGAGCAACACTCGCATATTGGGCTCCGCAAGGGGG GCATGTCGATATCCCGGCTCATCCTCAAAAAGGTCAACCTGAGCTGGTATTTACACCCGGGTTCAGTGGCTGTACGTTTG TTGCGGATAAATTAGATGAAAATACCCTTCGTGTCAGACATGTCCAGGGTGGGAAAGAGGATACAGAATATAACGACCTG GCGGTAAATGAACACGGTCAGGGGATGATCGATGCGATGGAGTACCGGGACTATGGCTACCATATGAATGGTCAGGAAGG GTTAATGGAAAATATTTCAGGTTCGGCATTTATGATATATGAAGAAGGACAATGGAATATAAAATACCAGAGTCTTGCGA ATGCCCCGGGCATCTTATCGGTAAAAGAAGATACTGCAGGTCTGTTTAAAAAACGGCAATATTTAAAAGTGGGTATGCGT CATATTAAGGGCGGCGGGGTTGTTAATAATGGCGCTATATCATTGCGTCATTAA Protein sequence : MSTSLFSQTPWVNVTDNRGLTVRSITYYRHPDSPQATDERTTFYQYNACGFLKHSADPRLQGAGLVNIRRQTDLAGRLLH KQSTDAGTTVCLDDAAGRPFITISNIRTADDGTQDISQAVSRTFVYEDATLPGRPLSMTEQVNGEAACISDRFVYAGNTD AERALNLAGQCISHYDTAGLIQTDSIALTRVPLSVTRRLLKDANNPDTVADWQGQDASVWNDLLASEAYNMLTATDATGM TLTTTDAQDNVQRVAYDVAGRQTGSWLRLRGANEQVIVKSLTYSAAGQKLREEHGNGVVTTYQYEPETQRLIGIKTERPA GHASGAKVLQDLRYEYDPVGNVLSIRNDAEETRFWRNQKVVPENTYTYDSLYQLVSGTGREMANAGQQGSSLRSPNVPLP TDSSAYTTYTRTYTYDNAGNLTLIRHSAPATNNNYTQAITVSDRSNRGVSGTLAEIPSQVDASFTAGGQQKYLQPGQRLS WTARNELLQVTLVAREGDADDRECYRYDTSSQRILKVVEQKANNIMQMRQVIYLPGLELRTTNSGGMQTENLQVICLGEA GRAQVRIMHWVEGKPADLANDQIRYSYDNLNGSSVLELDGAGNIISAEEYYPYGGTAVWSARSQVEANYKTLRYSGKERD ASGLYYYGYRYYQPWVGRWLSVDPAGTIDGLNMFRMCRNNPVTLTDYDGLAPHPRTRLGEGPLYEPKLSTGKDRDLPGAL PVISATPVSAEVTGTPIKLGDVLNDEVMKSIPLLTDLINPAKMDMDDATKKILTHPDRIGDILAFSAIHISVNENDNIHA LRIVDSKTSDYQKRAGATLAYWAPQGGHVDIPAHPQKGQPELVFTPGFSGCTFVADKLDENTLRVRHVQGGKEDTEYNDL AVNEHGQGMIDAMEYRDYGYHMNGQEGLMENISGSAFMIYEEGQWNIKYQSLANAPGILSVKEDTAGLFKKRQYLKVGMR HIKGGGVVNNGAISLRH |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| TccC2 | AAL18492.2 | TccC2 | Virulence | tcd island | Protein | 2e-170 | 60 |
| TccC5 | AAO17210.1 | TccC5 | Virulence | tcd island | Protein | 3e-172 | 59 |
| TccC3 | AAO17204.1 | TccC3 | Virulence | tcd island | Protein | 2e-176 | 59 |
| TccC4 | AAO17196.1 | TccC4 | Virulence | tcd island | Protein | 2e-169 | 58 |
