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Name : Rahaq2_4567 (Rahaq2_4567) Accession : YP_005220307.1 Strain : Genome accession: NC_016835 Putative virulence/resistance : Virulence Product : type VI secretion ATPase, ClpV1 family Function : - COG functional category : - COG ID : - EC number : - Position : 22 - 2739 bp Length : 2718 bp Strand : + Note : PFAM: AAA domain (Cdc48 subfamily); C-terminal, D2-small domain, of ClpB protein; ATPase family associated with various cellular activities (AAA); TIGRFAM: type VI secretion ATPase, ClpV1 family; manually curated DNA sequence : ATGGGCCTGGGTTTCCTGCAACGGAAATGGCTAAGGGCGGTAGCGTACCCAAAAAAGGAACTCAGCATGGAACATCAGTC AGCCGTATTACTTCGCCGCTTAAACCCGTATTGCGCCAAAGCACTGGAAGCCGCCGCAACGCTCTGCCAGACCCGCGCTC ACAGTGAAATTACCGTCGAGCACTGGCTGCTCAAATTGCTGGAACTGGGCGAAGGTGACATTACCGTACTGGCCCGCCGC TACGAGTGGGATATGGACACCTTATGGCAAAGCCTGCTGGCGCACCTCGACGCCCTGCCTCGTTCCGTGCATTCCCGCCC GCAACTTTCTCAGGATCTACAGGCACTGATGAAAGCGGGCTGGCTCGCAGCGTCACTTCAGGATGACAATCAGAACATCC GCAGCGTCAATCTGCTGGAAGCACTGATAGAGCAGCCGCGCCTGCTGCATTGCGAAGGATTATGGCCGCTGTTCAGCCTG AGCGAAGAGCATATCCGACGCCTTAAACCGGTGCTGGATACATTGTCCGAAGAACGTCCGGAGCTGCAACAACAGGAAAG CCTCAAGCGGATGTCATCGTCGCTCTCCGATAATACTGCCATTTCTAAACATGATGCAGGTATGGGCGGCCAGTCATTAA GCGAAGCGCTGCAGGCCGCACTGGATAAATTTACGCTGGATGTCACCGCAAAAGCCAAAGCCGGGCAGATTGATCCGGTA TTTGGCCGCGACAATGAAATCCGTCAGATGGTCGATATTCTCTCCCGCCGCCGTAAAAACAACCCGATTCTGGTCGGCGA ACCGGGCGTGGGGAAAACCGCACTGGTCGAAGGCCTGGCATTACGCATTGCGGAAGGCAACGTGCCGGACAGCCTCAAAA CCGTTAGTTTGCGCACGCTGGATTTGGGTCTGTTGCAGGCCGGTGCCGGTGTGAAAGGTGAGTTTGAGCAGCGTCTGAAA AATATTATCGATGCCGTGCAACAGTCGCCAACGCCGGTTCTGCTGTTTATAGATGAAGCCCATACCATTATCGGTGCCGG TAATCAGGCCGGTGGTGCAGATGCCGCTAACCTGCTAAAACCGGCCCTTGCCCGTGGCGAGCTGCGCACTATCGCTGCCA CCACCTGGTCTGAGTACAAACAGTATTTTGAGCGCGACGCTGCCCTTGAGCGCCGCTTCCAAATCGTCAAAGTCGATGAG CCGGATGACGAGATGGCCTGCCTGATGCTGCGCGGCCTGAAATCCCGTTACGCTCAACATCATGGCGTCCATATTACTGA CGAAGCGGTAAAAGCCGCCGTCAGCCTTTCCCGCCGTTATATCACAGGTCGCCAGTTACCCGACAAAGCGGTCGATCTGC TTGATACTGCGTCTGCGCGCGTGCGCATGAGCCTTGATACTCTGCCTGAAGATCTGATACGTCTGAAAGCGCAAATCACC GCGCTGGAAATGGAAGAACAAGCACTGCTGGAAGATATCGTGCTGGGCAATAAAACGCACGGCGACCGTCTGGAACAGAT TGAACAACAGGCTGACAACTTATGCGAACAGCTTACTGCGCTGAACACTCAGTACCATGCGGAAAAAAACCTGACACAAC AATTGCTGGAGACCCGTCAGGACATCAGCCGTCAGGAAGAAATCGCCAGCCTGCAAGAACAACTGAGTGATTTGCAGGGC AATACGCCGCTGCTGTCCCTGGACGTTGATGTGCGTACCGTCGCGAACGTGATCGCTGACTGGACCGGCGTGCCGCTCAC CAGCCTGCTGAAAGATGAGCAGACTGATTTACTGCAACTGGAAGATCACCTGAACAAACGCGTCGTCGGGCAGGATCATG TGCTGACCGATATGGCACAGCGTCTGCGCGCCGCTAAAACCGGCCTGACATCCGAGAATGGTCCGTTGGGTGTGTTTCTG CTGGTCGGTCCGAGTGGCGTGGGTAAAACCGAGACCGCACTTTCCCTTGCTGACTGTCTGTTCGGCGGCGAGAAATCCCT CATAACCATCAACCTCAGCGAGTATCAGGAAGCGCATACCGTTTCCCAGCTGAAAGGTTCACCTCCCGGTTATGTCGGTT ACGGTCAGGGCGGCATTCTCACCGAAGCCGTGCGTAAACGCCCCTACAGCGTCGTGCTGCTCGATGAAGTGGAAAAGGCG CACCGCGACGTCATTAACCTGTTTTATCAGGTATTCGACCGTGGTTTTATGCGCGACGGTGAAGGACGTGAAATCGACTT CCGCAATACCGTGATCCTGATGACCGCCAATCTCGGCAGCGACCACCTGATGCAACTGCTGGATGAACGGCCGGAAGCCA CTGACAGCGATTTACAGGAACTTCTGCGCCCGATCCTGCGCGATCATTTCCAGCCCGCCCTGCTCGCCCGTTTTCAGACG CTGATTTATCGTCCGCTGAACGCCGTCGCACTGCGCACTATCGTTGAGATGAAACTGGCACAAGTCGCGAAACGTCTGAA CAAGCACTATGGCCTGACCTGCTCCATCGAAGAAAGTCTGTACAACACGCTGGTCACCGCCTGCCTGCTACCTGACACCG GCGCGCGCAACATCGACAGCCTGCTAAATCAGCAGATCCTGCCGGTGCTGAGCCAGCAATTGCTGCAACGCAAGGCCGGA CAACAGTGCACAACGGCACTGGCACTGGGCTGGGATGAAGAGGAAGGGATCACACTGGAATTTGACGGAGAAGAGTAA Protein sequence : MGLGFLQRKWLRAVAYPKKELSMEHQSAVLLRRLNPYCAKALEAAATLCQTRAHSEITVEHWLLKLLELGEGDITVLARR YEWDMDTLWQSLLAHLDALPRSVHSRPQLSQDLQALMKAGWLAASLQDDNQNIRSVNLLEALIEQPRLLHCEGLWPLFSL SEEHIRRLKPVLDTLSEERPELQQQESLKRMSSSLSDNTAISKHDAGMGGQSLSEALQAALDKFTLDVTAKAKAGQIDPV FGRDNEIRQMVDILSRRRKNNPILVGEPGVGKTALVEGLALRIAEGNVPDSLKTVSLRTLDLGLLQAGAGVKGEFEQRLK NIIDAVQQSPTPVLLFIDEAHTIIGAGNQAGGADAANLLKPALARGELRTIAATTWSEYKQYFERDAALERRFQIVKVDE PDDEMACLMLRGLKSRYAQHHGVHITDEAVKAAVSLSRRYITGRQLPDKAVDLLDTASARVRMSLDTLPEDLIRLKAQIT ALEMEEQALLEDIVLGNKTHGDRLEQIEQQADNLCEQLTALNTQYHAEKNLTQQLLETRQDISRQEEIASLQEQLSDLQG NTPLLSLDVDVRTVANVIADWTGVPLTSLLKDEQTDLLQLEDHLNKRVVGQDHVLTDMAQRLRAAKTGLTSENGPLGVFL LVGPSGVGKTETALSLADCLFGGEKSLITINLSEYQEAHTVSQLKGSPPGYVGYGQGGILTEAVRKRPYSVVLLDEVEKA HRDVINLFYQVFDRGFMRDGEGREIDFRNTVILMTANLGSDHLMQLLDERPEATDSDLQELLRPILRDHFQPALLARFQT LIYRPLNAVALRTIVEMKLAQVAKRLNKHYGLTCSIEESLYNTLVTACLLPDTGARNIDSLLNQQILPVLSQQLLQRKAG QQCTTALALGWDEEEGITLEFDGEE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| STY0294 | NP_454876.1 | ClpB-like protein | Not tested | SPI-6 | Protein | 1e-152 | 44 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Rahaq2_4567 | YP_005220307.1 | type VI secretion ATPase, ClpV1 family | VFG2076 | Protein | 3e-172 | 46 |
| Rahaq2_4567 | YP_005220307.1 | type VI secretion ATPase, ClpV1 family | VFG2084 | Protein | 1e-140 | 44 |
| Rahaq2_4567 | YP_005220307.1 | type VI secretion ATPase, ClpV1 family | VFG0079 | Protein | 3e-113 | 41 |
