Gene Information

Name : STBHUCCB_9660 (STBHUCCB_9660)
Accession : YP_005216542.1
Strain : Salmonella enterica P-stx-12
Genome accession: NC_016832
Putative virulence/resistance : Virulence
Product : Flagellar biosynthetic protein fliP
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 994482 - 995219 bp
Length : 738 bp
Strand : -
Note : similar to flagellar biosynthesis protein FliP PRK05699; similar to Flagellar biosynthetic protein fliP of Bacteria UniRef RepID=FLIP_BUCBP

DNA sequence : 
ATGCGCCGTTTGTTATTCCTTTCTCTGGCGGGTCTGTGGCTTTTTAGTCCCGCCGCCGCTGCGCAACTGCCGGGGCTTAT
CAGCCAACCATTAGCGGGCGGAGGCCAAAGCTGGTCATTATCCGTCCAGACGCTGGTTTTCATCACCTCGCTGACGTTTC
TGCCGGCGATTTTACTGATGATGACGAGCTTCACGCGTATCATCATTGTTTTTGGCTTGTTGCGTAACGCGCTGGGCACG
CCCTCGGCACCGCCAAATCAGGTGTTACTCGGACTGGCGTTGTTTTTGACCTTTTTTATTATGTCGCCCGTCATTGACAA
GATTTACGTGGATGCTTACCAGCCGTTTAGCGAGCAGAAAATTTCTATGCAGGAAGCGCTGGATAAAGGCGCGCAACCGT
TACGCGCGTTCATGCTGCGCCAAACCCGCGAAGCCGATCTGGCGCTGTTTGCCCGTCTGGCCAATAGCGGTCCGTTACAG
GGACCGGAAGCAGTACCGATGCGTATCCTCCTGCCCGCTTATGTCACCAGCGAATTAAAGACGGCGTTTCAGATCGGTTT
TACGATTTTCATCCCTTTTTTGATTATCGACCTGGTGATCGCCAGCGTACTGATGGCGTTAGGGATGATGATGGTGCCGC
CAGCGACAATCGCCCTGCCGTTTAAGCTGATGCTGTTTGTGCTGGTCGATGGTTGGCAATTGCTTGTGGGGTCGCTGGCC
CAAAGCTTTTACAGTTAG

Protein sequence : 
MRRLLFLSLAGLWLFSPAAAAQLPGLISQPLAGGGQSWSLSVQTLVFITSLTFLPAILLMMTSFTRIIIVFGLLRNALGT
PSAPPNQVLLGLALFLTFFIMSPVIDKIYVDAYQPFSEQKISMQEALDKGAQPLRAFMLRQTREADLALFARLANSGPLQ
GPEAVPMRILLPAYVTSELKTAFQIGFTIFIPFLIIDLVIASVLMALGMMMVPPATIALPFKLMLFVLVDGWQLLVGSLA
QSFYS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
escR AFO66317.1 putative LEE-encoded type III secretion system factor Virulence SESS LEE Protein 1e-29 43
escR AFO66400.1 putative LEE-encoded type III secretion system factor Virulence SESS LEE Protein 1e-29 43
hrcR AAT96262.1 HrcR Virulence S-PAI Protein 3e-26 42
hrcR AAT96303.1 HrcR Virulence S-PAI Protein 3e-26 42
hrcR AAT96343.1 HrcR Virulence S-PAI Protein 3e-26 42
escR CAI43889.1 EscR protein Virulence LEE Protein 9e-31 42
escR YP_003236103.1 T3SS structure protein EscR Virulence LEE Protein 1e-30 42
escR AAC31528.1 L0049 Virulence LEE Protein 9e-31 42
escR NP_290283.1 type III secretion system protein Virulence LEE Protein 1e-30 42
escR ACU09473.1 type III secretion system protein EscR Virulence LEE Protein 9e-31 42
escR AAC38369.1 EscR Virulence LEE Protein 6e-30 42
ECs4583 NP_312610.1 type III secretion system protein Virulence LEE Protein 5e-30 42
escR AAK26700.1 EscR Virulence LEE Protein 9e-31 42
escR AAL57527.1 EscR Virulence LEE Protein 9e-31 42
escR YP_003223490.1 T3SS structure protein EscR Virulence LEE Protein 1e-30 42
escR CAC81847.1 EscR protein Virulence LEE II Protein 9e-31 42
escR YP_003232138.1 type III secretion system protein Virulence LEE Protein 1e-30 42
hrcR AAT96146.1 HrcR Virulence T-PAI Protein 1e-21 41
hrcR AAT96200.1 HrcR Virulence T-PAI Protein 8e-22 41
yscR NP_456109.1 putative type III secretion protein Virulence SPI-2 Protein 2e-29 41
yscR NP_805090.1 type III secretion system protein Virulence SPI-2 Protein 2e-29 41
ssaR YP_216427.1 type III secretion system protein Virulence SPI-2 Protein 6e-30 41
ssaR CAA68199.1 secretion system apparatus, SsaR Virulence SPI-2 Protein 4e-30 41
ssaR NP_460384.1 type III secretion system protein Virulence SPI-2 Protein 6e-30 41
YPO0270 YP_002345352.1 type III secretion system protein Virulence Not named Protein 2e-30 41
lscR AAO18040.1 LscR Virulence TTSS locus Protein 1e-30 41
unnamed AAL06354.1 EscR Virulence LEE Protein 1e-29 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
STBHUCCB_9660 YP_005216542.1 Flagellar biosynthetic protein fliP VFG2338 Protein 1e-91 86
STBHUCCB_9660 YP_005216542.1 Flagellar biosynthetic protein fliP VFG2494 Protein 2e-75 69
STBHUCCB_9660 YP_005216542.1 Flagellar biosynthetic protein fliP VFG1259 Protein 2e-64 60
STBHUCCB_9660 YP_005216542.1 Flagellar biosynthetic protein fliP VFG2016 Protein 7e-60 56
STBHUCCB_9660 YP_005216542.1 Flagellar biosynthetic protein fliP VFG0188 Protein 1e-33 43
STBHUCCB_9660 YP_005216542.1 Flagellar biosynthetic protein fliP VFG0394 Protein 2e-31 42
STBHUCCB_9660 YP_005216542.1 Flagellar biosynthetic protein fliP VFG0827 Protein 5e-31 42
STBHUCCB_9660 YP_005216542.1 Flagellar biosynthetic protein fliP VFG0715 Protein 3e-30 42
STBHUCCB_9660 YP_005216542.1 Flagellar biosynthetic protein fliP VFG0519 Protein 2e-30 41
STBHUCCB_9660 YP_005216542.1 Flagellar biosynthetic protein fliP VFG0044 Protein 2e-33 41