Gene Information

Name : STBHUCCB_47890 (STBHUCCB_47890)
Accession : YP_005220203.1
Strain : Salmonella enterica P-stx-12
Genome accession: NC_016832
Putative virulence/resistance : Unknown
Product : Helix-turn-helix, Fis-type
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4665001 - 4665267 bp
Length : 267 bp
Strand : +
Note : similar to Helix-turn-helix, Fis-type of Proteobacteria UniRef RepID=A4TS13_YERPP

DNA sequence :
ATGAAAAAGACCCGTTATACCGAAGAACAGACTGCATTTGCCCTGAAACAGGCTGAAACCGGCACCCGCGTCGGGGAAGT
CTGCAGAAAGATGGGAATTTCTGAGGCCACATTTTACAACTGGAAGAAAAAATTTGCCGGGCCGGGCGTGACGGAACAGC
GGCGTCTGCGGCAACTGGAGGATGAGAATCAGCGGCTGAAGAAGCTGGTCGCTGAGCTGAGTCTCGACAAGGAGATGCTG
CAGGAGGTACTGAAGCAAAAGTTCTGA

Protein sequence :
MKKTRYTEEQTAFALKQAETGTRVGEVCRKMGISEATFYNWKKKFAGPGVTEQRRLRQLEDENQRLKKLVAELSLDKEML
QEVLKQKF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tnp AAL78293.1 putative truncated transposase Not tested Hrp PAI Protein 6e-25 66
XCV0438 YP_362169.1 ISRSO12 transposase (fragment) Not tested Hrp PAI Protein 9e-25 66
unnamed ABR13351.1 insertion sequence IS407 OrfA Not tested PAGI-5 Protein 2e-16 53
unnamed ABR13539.1 insertion sequence IS407 OrfA Not tested PAGI-8 Protein 2e-16 53
EXA9 ABD94680.1 IS407 transposase OrfA Not tested ExoU island A Protein 3e-16 53
unnamed AAK01522.1 transposase A Not tested PAGI-1 Protein 4e-16 52
trp1400A CAB46581.1 IS1400 transposase A Not tested HPI Protein 5e-17 45