Gene Information

Name : STBHUCCB_46280 (STBHUCCB_46280)
Accession : YP_005220044.1
Strain : Salmonella enterica P-stx-12
Genome accession: NC_016832
Putative virulence/resistance : Unknown
Product : HTH-type transcriptional regulator yjdC
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4514248 - 4514823 bp
Length : 576 bp
Strand : -
Note : similar to putative transcriptional regulator PRK11640; similar to HTH-type transcriptional regulator yjdC of Bacteria UniRef RepID=YJDC_ECOL6

DNA sequence :
GTGCAACGTGAAGATATTCTGGGAGAAGCCCTGAAATTACTGGAGACGCAAGGGATAGCCGATACTACGCTGGAAATGGT
GGCGGAGCGCGTAAATCGCCCACTCGACACATTACAGCGTTTCTGGCCAGATAAAGAAGCCATTTTATATGACGCGCTAC
GTTATCTGAGTCAGCAGGTAGATATCTGGCGACGCCAGCTTCTTCTTGATGAGACGTTTTCTGCTGAACAAAAGCTACTG
GCACGCTACAGCGCGCTTTCGGAATGTGTCAGTAATAACCGTTATCCTGGTTGCTTGTTCATTGCCGCCTGTACGTTTTA
TCCCGACCCAACCCATCCTATTCACCAACTGGCTAATCAACAAAAACGCGCGGCACATGATTTTACCCATGGGCTACTGA
CCACGCTGGAAATTGACGATCCGGCGATGGTTGCAAGGCAGATGGAACTGGTGCTGGAAGGTTGTCTCAGCCGAATGCTG
GTCAACCGCAGTCAGGCTGATGTAGATACCGCTCAGCGGTTGGCGGAAGATATTCTGCGTTTTGCACAGTGCCGTCAGGG
TGGAGCGCTCACCTGA

Protein sequence :
MQREDILGEALKLLETQGIADTTLEMVAERVNRPLDTLQRFWPDKEAILYDALRYLSQQVDIWRRQLLLDETFSAEQKLL
ARYSALSECVSNNRYPGCLFIAACTFYPDPTHPIHQLANQQKRAAHDFTHGLLTTLEIDDPAMVARQMELVLEGCLSRML
VNRSQADVDTAQRLAEDILRFAQCRQGGALT

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
YPO0341 CAF28570.1 putative transcription regulator Not tested YAPI Protein 6e-59 64