Gene Information

Name : STBHUCCB_45740 (STBHUCCB_45740)
Accession : YP_005219992.1
Strain : Salmonella enterica P-stx-12
Genome accession: NC_016832
Putative virulence/resistance : Unknown
Product : Major capsid protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4463017 - 4464081 bp
Length : 1065 bp
Strand : -
Note : similar to Major capsid protein (GpN) of Proteobacteria UniRef RepID=D3VKM6_XENNA

DNA sequence :
ATGAAAAAGAAAACCCGCTTTGCCTTTAACGCTTACCTGCAGCAGCTGGCGCGCCTGAATGGTGTGGATGTTGAAGAACT
CTCCAGCAAGTTCACCGTGGAGCCGTCCGTGCAGCAGACTCTGGAAGACCACATCCAGCAGTCTGCTGCTTTCCTGACGC
TGATTAACATCACGCCGGTCACTGAGCAGTCCGGTCAGTTGCTGGGGCTGGGCGTTGGCAGCACCATTGCCGGAACCACC
GATACCACCACCAAAGAGCGCGAGCCTACCGATCCGACGCTGATGGAAGACGTGGAATACAAATGCGAGCAGACCAACTT
TGATACGGTGCTGACCTACGCAAAACTGGACCTGTGGGCGAAATTCCAGGACTTCCAGGTGCGTATCCGCAACGCCATCG
TCAAGCGTCAGGCGCTGGACCGCATCATGATCGGCTTTAACGGCGTGAAGCGCGCCAAAACCTCCAACCGTGCTGAAAAC
CCGCTGCTGCAGGACGTCAATAAAGGCTGGCTGCAGAAAATCCGCGAAGACGCGCCGGATCACGTCATGGGCAGCAAAAC
CGCAGAAGACGGCACCACTACTGCAGAACCAGTAAAAGTAGGTCCGGGTGGTAAGTATGTAAATCTTGACGCGGTGGTGA
TGGATACCGTCAACGAGCTGATCGATGTGGAGTATCAGGATGATGACGAGCTGGTTGTTGTCTGCGGACGTGAACTGCTG
TCTGACAAGTATTTCCCGCTGGTCAACAAAGAGCAGGACAACAGCGAGAAAATCGCCGCCGATCTGATCATCAGCCAGAA
ACGCATGGGCGGCCTGCAGGCTGTGCGCGCGCCTTTCTTCCCGGCAAATGCCCTGCTGATCACCCGTCTGGATAACCTGT
CCATCTACTGGCAGGAAGACACCCGCCGCCGTTCAGTTATCGACAACCCGAAACGCGACCGGATTGAAAACTTTGAATCC
GTCAACGAGGCGTATGTGGTCGAGGACTACCGCTGCGCGGCGCTGGTAGAAAACATCGAAATCGGTGATTTCAGCGCGCC
TGCCGCACCGGAAAGTGGGGAATAA

Protein sequence :
MKKKTRFAFNAYLQQLARLNGVDVEELSSKFTVEPSVQQTLEDHIQQSAAFLTLINITPVTEQSGQLLGLGVGSTIAGTT
DTTTKEREPTDPTLMEDVEYKCEQTNFDTVLTYAKLDLWAKFQDFQVRIRNAIVKRQALDRIMIGFNGVKRAKTSNRAEN
PLLQDVNKGWLQKIREDAPDHVMGSKTAEDGTTTAEPVKVGPGGKYVNLDAVVMDTVNELIDVEYQDDDELVVVCGRELL
SDKYFPLVNKEQDNSEKIAADLIISQKRMGGLQAVRAPFFPANALLITRLDNLSIYWQEDTRRRSVIDNPKRDRIENFES
VNEAYVVEDYRCAALVENIEIGDFSAPAAPESGE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
t4319 NP_807914.1 major capsid protein Not tested SPI-7 Protein 7e-148 100
STY4625 NP_458707.1 putative major capsid protein Not tested SPI-7 Protein 7e-148 100
unnamed ABR13466.1 predicted major capsid protein Not tested PAGI-6 Protein 2e-71 52