|
Name : STBHUCCB_45740 (STBHUCCB_45740) Accession : YP_005219992.1 Strain : Salmonella enterica P-stx-12 Genome accession: NC_016832 Putative virulence/resistance : Unknown Product : Major capsid protein Function : - COG functional category : - COG ID : - EC number : - Position : 4463017 - 4464081 bp Length : 1065 bp Strand : - Note : similar to Major capsid protein (GpN) of Proteobacteria UniRef RepID=D3VKM6_XENNA DNA sequence : ATGAAAAAGAAAACCCGCTTTGCCTTTAACGCTTACCTGCAGCAGCTGGCGCGCCTGAATGGTGTGGATGTTGAAGAACT CTCCAGCAAGTTCACCGTGGAGCCGTCCGTGCAGCAGACTCTGGAAGACCACATCCAGCAGTCTGCTGCTTTCCTGACGC TGATTAACATCACGCCGGTCACTGAGCAGTCCGGTCAGTTGCTGGGGCTGGGCGTTGGCAGCACCATTGCCGGAACCACC GATACCACCACCAAAGAGCGCGAGCCTACCGATCCGACGCTGATGGAAGACGTGGAATACAAATGCGAGCAGACCAACTT TGATACGGTGCTGACCTACGCAAAACTGGACCTGTGGGCGAAATTCCAGGACTTCCAGGTGCGTATCCGCAACGCCATCG TCAAGCGTCAGGCGCTGGACCGCATCATGATCGGCTTTAACGGCGTGAAGCGCGCCAAAACCTCCAACCGTGCTGAAAAC CCGCTGCTGCAGGACGTCAATAAAGGCTGGCTGCAGAAAATCCGCGAAGACGCGCCGGATCACGTCATGGGCAGCAAAAC CGCAGAAGACGGCACCACTACTGCAGAACCAGTAAAAGTAGGTCCGGGTGGTAAGTATGTAAATCTTGACGCGGTGGTGA TGGATACCGTCAACGAGCTGATCGATGTGGAGTATCAGGATGATGACGAGCTGGTTGTTGTCTGCGGACGTGAACTGCTG TCTGACAAGTATTTCCCGCTGGTCAACAAAGAGCAGGACAACAGCGAGAAAATCGCCGCCGATCTGATCATCAGCCAGAA ACGCATGGGCGGCCTGCAGGCTGTGCGCGCGCCTTTCTTCCCGGCAAATGCCCTGCTGATCACCCGTCTGGATAACCTGT CCATCTACTGGCAGGAAGACACCCGCCGCCGTTCAGTTATCGACAACCCGAAACGCGACCGGATTGAAAACTTTGAATCC GTCAACGAGGCGTATGTGGTCGAGGACTACCGCTGCGCGGCGCTGGTAGAAAACATCGAAATCGGTGATTTCAGCGCGCC TGCCGCACCGGAAAGTGGGGAATAA Protein sequence : MKKKTRFAFNAYLQQLARLNGVDVEELSSKFTVEPSVQQTLEDHIQQSAAFLTLINITPVTEQSGQLLGLGVGSTIAGTT DTTTKEREPTDPTLMEDVEYKCEQTNFDTVLTYAKLDLWAKFQDFQVRIRNAIVKRQALDRIMIGFNGVKRAKTSNRAEN PLLQDVNKGWLQKIREDAPDHVMGSKTAEDGTTTAEPVKVGPGGKYVNLDAVVMDTVNELIDVEYQDDDELVVVCGRELL SDKYFPLVNKEQDNSEKIAADLIISQKRMGGLQAVRAPFFPANALLITRLDNLSIYWQEDTRRRSVIDNPKRDRIENFES VNEAYVVEDYRCAALVENIEIGDFSAPAAPESGE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| STY4625 | NP_458707.1 | putative major capsid protein | Not tested | SPI-7 | Protein | 7e-148 | 100 |
| t4319 | NP_807914.1 | major capsid protein | Not tested | SPI-7 | Protein | 7e-148 | 100 |
| unnamed | ABR13466.1 | predicted major capsid protein | Not tested | PAGI-6 | Protein | 2e-71 | 52 |
