Gene Information

Name : STBHUCCB_45490 (STBHUCCB_45490)
Accession : YP_005219967.1
Strain : Salmonella enterica P-stx-12
Genome accession: NC_016832
Putative virulence/resistance : Unknown
Product : Late control protein D protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4446596 - 4447696 bp
Length : 1101 bp
Strand : -
Note : similar to Late control gene D protein of root UniRef RepID=VPD_BP186

DNA sequence :
GTGAATTTTAGCTCTGATCTTTTTGGCCTGAACAGCAGAAGCCCGGCTTTCAGTATCACTATTGAAGGTAAGGACGTGAC
CACCGCGCTGGATGCGCGCCTGATGAGTCTGACGCTGACCGATAACCGGGGTTTTGAGGCTGACCAGCTTGATCTGGAGC
TGGACGACGCCGACGGGCAGATCGTTCTGCCGCGACGTGGTGCCGTTATTCAACTGGCGCTGGGGTGGAAGGGCCAGCCG
CTTTTCCCAAAAGGGGCATTTACGGTAGATGAGATTGAGCACAGCGGTGCTCCTGATCGTCTGACTATCCGTGCCCGTAG
CGCTGATTTCCGTGAAACCCTCAATACCCGGCGCGAAAAATCATGGCATCAGACAACGGTGGGGGAGGTGGTAAAGGAAA
TCGCCGCCCGGCATAACCTCAAAGTGGCGCTGGGTAAAGACCTGACGGATAAGGTGCTGGATCATATGGACCAGACCAAT
GAAAGCGATGCAAGTTTTCTGATGAAACTGGCGAGACAGTATGGGGCGATTGCTTCCGTTAAGGACGGGAACCTGCTGTT
TATCCGGCAGGGACAGGGAAGAACGGCGAGCGGCAAGCCGCTGCCGGTTATCACTATCACGCGCAAAGCCGGTGACGGTC
ATCGTTTTACCTTGGCTGATCGTGGCGCGTATACGGGCGTTATTGCCAGTTGGCTGCATACACGTGAACCAAAGAAGAAA
GAAACAACGCAGGTAAAGCGCCGTCACAAGAAAGTCGCCACACCCAAAGAGCCGGAAGCAAAACAGGGTGATTATCTGGT
GGGAACGGATGAAAACGTGCTGGTTCTTAATCGTACCTACGCCAACCGCGGCAACGCTGAGCGTGCGGCAAAAATGCAAT
GGGAGCGCCTGCAACGTGGTGTTGCGTCTTTCTCCCTGCAGCTCGCAGAGGGGCGGGCAGATCTCTACACCGAAATGCCA
GTAAAGGTGAGCGGTTTTAAGCAGCCTATCGACGATGCCGAATGGACCATTACAACGTTGACGCATACGGTCAGCCCGGA
TAATGGTTTTACTACCAGTCTGGAGCTAGAAGTAAAGATTGATGATTTAGAAATAGAATAA

Protein sequence :
MNFSSDLFGLNSRSPAFSITIEGKDVTTALDARLMSLTLTDNRGFEADQLDLELDDADGQIVLPRRGAVIQLALGWKGQP
LFPKGAFTVDEIEHSGAPDRLTIRARSADFRETLNTRREKSWHQTTVGEVVKEIAARHNLKVALGKDLTDKVLDHMDQTN
ESDASFLMKLARQYGAIASVKDGNLLFIRQGQGRTASGKPLPVITITRKAGDGHRFTLADRGAYTGVIASWLHTREPKKK
ETTQVKRRHKKVATPKEPEAKQGDYLVGTDENVLVLNRTYANRGNAERAAKMQWERLQRGVASFSLQLAEGRADLYTEMP
VKVSGFKQPIDDAEWTITTLTHTVSPDNGFTTSLELEVKIDDLEIE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
STY4601 NP_458684.1 putative regulator of late gene expression Not tested SPI-7 Protein 2e-163 100
t4295 NP_807892.1 regulator of late gene expression Not tested SPI-7 Protein 2e-163 100
unnamed ABR13490.1 phage late control D Not tested PAGI-6 Protein 7e-55 43