Gene Information

Name : STBHUCCB_45270 (STBHUCCB_45270)
Accession : YP_005219945.1
Strain : Salmonella enterica P-stx-12
Genome accession: NC_016832
Putative virulence/resistance : Unknown
Product : PFL4710 family integrating conjugative element protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4425719 - 4426687 bp
Length : 969 bp
Strand : +
Note : similar to PFL4710 family integrating conjugative element protein of Enterobacteriaceae UniRef RepID=D4E1K8_SEROD

DNA sequence :
ATGAAATCTCTTCGTCTGAAGCGAGCGTTACTGTCAGTCATGCTTATCACCGGCGGCATGGAGGTTCAGGCTGCGTTGAA
CACTGCCTCGATTGTGGCCAGCAGTATTTCTCCGTCGTGTATCAGCTGGAGAATCAGCGGTATCTGCTACTGGCTGATGT
GTACCCCTTTCGGTTGTACAGTAAAAACCTCGATAAAAGTGCATCACTTTATTCCGGAAGCTGTTGTTTCGACTTATCAG
GCGTCTGGTGGAAATCCGTGGACCGAAATGTCATTAGTGAGTCAGACGGCCGGAGGGGTAGAGAATGCTGTAACGGGGGC
GTTATCCGGGCTTGCTGCCGGTGGCGGAAACCAGGAACAGAAATTCCCGGGTACCCGTAAGAGTAATGTGCGATTTAAAT
ATGCAGATGCCATTGGCCATCCTTCAACATCGATTATTGGCGGCCAAATCCCCGGTTACTCATGCAACAGCGCCGCCACA
CCACTGGTACCCTATTTTCTTAGCACGCTTGATACGCTTGCCTGGCGTACTGGTGTTCCTGAATCGGTTTATCCTGAGGC
ACTCATTCCTGGCAGACGCGAAATCGGCTCCACATCGGCACAAAATATATGGGGAAATCTCTATCCCCGAAGCGGCTTTG
TTACTCAGCAGGATGACTACAAATCCGGGGCAATCGTTGCGCAGCGTGTAGCTGACATTATCACCCGAACTAACCAGATC
CACGTCTATAAGCCCCTCACCGGAAACCCGTCTGCCGGTTACTGGCCTCCCGAACCTGTTAAAGAGAATACCGGCACGCA
AAATCATAAATGGCAGCAGTTATCACCAACGCTCTCTATGTCATGCAGCGTATTCCCGGATACAGGAAAAATTGCGGAAA
ACGGTAATTACGCCTGGACACTCTGGCAGCCATATAGCTGCTGTAAACGCCGTGGGCAAACATTTCTCTATAGCACCGAC
ATAAATTAA

Protein sequence :
MKSLRLKRALLSVMLITGGMEVQAALNTASIVASSISPSCISWRISGICYWLMCTPFGCTVKTSIKVHHFIPEAVVSTYQ
ASGGNPWTEMSLVSQTAGGVENAVTGALSGLAAGGGNQEQKFPGTRKSNVRFKYADAIGHPSTSIIGGQIPGYSCNSAAT
PLVPYFLSTLDTLAWRTGVPESVYPEALIPGRREIGSTSAQNIWGNLYPRSGFVTQQDDYKSGAIVAQRVADIITRTNQI
HVYKPLTGNPSAGYWPPEPVKENTGTQNHKWQQLSPTLSMSCSVFPDTGKIAENGNYAWTLWQPYSCCKRRGQTFLYSTD
IN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
STY4576 NP_458661.1 hypothetical protein Not tested SPI-7 Protein 2e-142 100
t4273 NP_807871.1 hypothetical protein Not tested SPI-7 Protein 2e-142 100
unnamed AAX39458.1 unknown Not tested Hrp PAI Protein 7e-85 68
PMI2573 YP_002152292.1 hypothetical protein Not tested Not named Protein 5e-95 66
YpsIP31758_3701 YP_001402655.1 hypothetical protein Not tested YAPI Protein 7e-99 65
YE3467 YP_001007628.1 hypothetical protein Not tested YAPI Protein 6e-96 64
api54 CAF28528.1 conserved hypothetical protein Not tested YAPI Protein 2e-98 64
pph89 CAI36130.1 hypothetical protein Not tested PPHGI-1 Protein 1e-76 50
unnamed ABR13357.1 hypothetical protein Not tested PAGI-5 Protein 5e-75 49
ORF SG51 AAN62273.1 hypothetical protein Not tested PAGI-3(SG) Protein 2e-75 48
ORF C43 AAN62136.1 hypothetical protein Not tested PAGI-2(C) Protein 7e-75 48
RL017 AAP84144.1 conserved hypothetical protein Not tested PAPI-1 Protein 2e-74 48
Pmu_02990 YP_005176198.1 integrating conjugative element protein, PFL family Not tested ICEPmu1 Protein 6e-65 47
EXA20 ABD94629.1 conserved hypothetical protein Not tested ExoU island A Protein 9e-77 47