Name : STBHUCCB_45010 (STBHUCCB_45010) Accession : YP_005219921.1 Strain : Salmonella enterica P-stx-12 Genome accession: NC_016832 Putative virulence/resistance : Virulence Product : PilV2 Function : - COG functional category : - COG ID : - EC number : - Position : 4405558 - 4406865 bp Length : 1308 bp Strand : + Note : similar to PilV2 of Salmonella enterica subsp. enterica UniRef RepID=Q6X909_SALET DNA sequence : ATGAAAAAACAAAAACATGATGGCGGCTTTGTGGCGATGAGCGTGGGAGCCGGGTTACTCATTGTTCTGGTGATGGCCTC GTTGGCTGCCAGATATATGGGAGATTATCTGAAATCCCGTGAGTGGCAGGTTGTGGCCATGCAAACCAATCGTTTCACTC AGGCAGTCTCATCCTATGTTGGAAAGTTTTATCCGACGGTGCTGGCATCAGCGACCACAACTACACCTGCAGTGGTAACA ACTCAAATGCTGAAGAATACAGGTTTGCTGCCGGCGAGCTTTAGTGAGACCAACAGTTATGGCCAGCAGTATCAGGCGAT GATAGTCCGGAATCAGCAAAATCAGGAGTTGCTTCAGGGCATGGTGGTCAGCCGCGGTGGTCATGCTATGCCTTTTACAG CGCTAAGCCAGATCTCGAAAGACATTACCGCCGGCTTCGGAGGATACGTTGAAGACGGGCAAACGGCGGTGGGAGCGATG CGCAGCTGGCGAATTCCGCTGTCCTCCTACGGGACCAGCACCGGAAGAGGTCATCTGGCCGTCATGTTGAGCACGGATGA CCTGTCAGGGGCGCGTGAAGACGGGGACAGGCTGTATCGTTTTCAGGTCAATGGTCGTCCGGATTTGAACAAGATGCACA CAGCTATTGATATGGGAGGAAATAACCTGAATAGCGTCGGCACTGTTACGGCCAGTAATGTGGCTGGCCAGAATGGGAAT TTTGGCGTAAGTCTGGTCAGTAATGGTCCGATCACTGCGGGGGGAGATATTCGAAGCACAGGGGGATGGATTGTAACCCG CAGTGGTAAAGGTTGGATGGATGAGACCCATGGTGGTGGTTTGTATATGTCAGATAACGACTGGTTACGGATCCTGAATA ACAAGGGGTTTTATACCGGTGGTGAAATTCGCGGTGGGAAGATTCGCTCGGATGGGGACGTATCGGCAGGCGGTATTTTA ACGCTGGATAAGATTAATGTTGCCAGCACTGCTTGTCCTGTAAATGGTGCAATAAGTCGTGATACAGCAGGTGCCACACT TTCGTGCCAATCCGGTATTTGGAGTTCTTATCGGCTGAACTTTAATATTCAGACATTTAACGTCGGTAAAAATGTAAGAA ATCAGTATATTGGAGTGCATGCCTACTGCGCATGGACATATCTCAATGGTTCACCTCTGGGCGGGTTTCAGGAGATACAC TCGAACGGTTCCAACGGCTGGTATATCTCTAACTACAGATGGGGGAACTACGAATCCGGAGGTACTATTTCGGTAACCTG TTTGAACTTACCTGGCGCCGGATTATGA Protein sequence : MKKQKHDGGFVAMSVGAGLLIVLVMASLAARYMGDYLKSREWQVVAMQTNRFTQAVSSYVGKFYPTVLASATTTTPAVVT TQMLKNTGLLPASFSETNSYGQQYQAMIVRNQQNQELLQGMVVSRGGHAMPFTALSQISKDITAGFGGYVEDGQTAVGAM RSWRIPLSSYGTSTGRGHLAVMLSTDDLSGAREDGDRLYRFQVNGRPDLNKMHTAIDMGGNNLNSVGTVTASNVAGQNGN FGVSLVSNGPITAGGDIRSTGGWIVTRSGKGWMDETHGGGLYMSDNDWLRILNNKGFYTGGEIRGGKIRSDGDVSAGGIL TLDKINVASTACPVNGAISRDTAGATLSCQSGIWSSYRLNFNIQTFNVGKNVRNQYIGVHAYCAWTYLNGSPLGGFQEIH SNGSNGWYISNYRWGNYESGGTISVTCLNLPGAGL |
Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
pilV | NP_458638.1 | prepilin | Virulence | SPI-7 | Protein | 0.0 | 100 |
pilV | NP_807849.1 | prepilin | Virulence | SPI-7 | Protein | 0.0 | 100 |
pilV | AAC38069.1 | PilV | Virulence | SPI-7 | Protein | 0.0 | 100 |
YE3498 | YP_001007659.1 | putative type IV pilus protein | Virulence | YAPI | Protein | 6e-80 | 53 |
YpsIP31758_3727 | YP_001402681.1 | shufflon protein | Not tested | YAPI | Protein | 9e-78 | 52 |
pilV | CAF28494.1 | secondary type IV prepilin | Virulence | YAPI | Protein | 1e-76 | 51 |
Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
STBHUCCB_45010 | YP_005219921.1 | PilV2 | VFG2317 | Protein | 2e-80 | 53 |