|
Name : STBHUCCB_44970 (STBHUCCB_44970) Accession : YP_005219917.1 Strain : Salmonella enterica P-stx-12 Genome accession: NC_016832 Putative virulence/resistance : Virulence Product : hypothetical protein Function : - COG functional category : - COG ID : - EC number : - Position : 4402696 - 4403781 bp Length : 1086 bp Strand : + Note : similar to Type II secretory pathway, component PulF COG1459'; similar to PilR of Salmonella enterica subsp. enterica UniRef RepID=Q6X913_SALET DNA sequence : ATGAGTCCTTTATACCGTCTTCGCCGGGCGCTGGCGCGACGTTTTTTTACGTCCGGATACCGTCTGCGTTTTTACCGCAT GCTGTCGTTGCAGATGAGAAATGGCGTGAAGTTGTTAGAGGCGCTGGAGCAAATCAGCAATATGTATACCGATTTTGGGC AGCGGACTCATGGTTTCGGTTTTCTGGTGGACGACTGCCGGGCGGCACTCACTGACAACAGCGGGGATAACTCCCTTGAG CATGCTCTTGCAAACTGGGTTCCGGCGGAGGAGGCGGCGCTCATCAGCGCGGGTATGTTCAGTGGTCGGTTACCTGAGGC GCTCGCAGAGGCGGAAATCCTGATTGACTGCCGGCGGCGTATCCGACAGGCGATCATGAGGATGGCCGTTTATCCCCTAG GTTGCATTGCGATGCTCGGTGGCACGCTGGGTGTTATTCAGACGCAGCTTATTCCAACGCTGGCCGGGATGTCAGATCCG CAGACATGGACCGGAGTGCTGGGAAGCCTTAACGGCCTGCTGATTTTTTTTACTGAGCATGGCGTGGTGATGGGGGCCGG GCTGGCACTGTTGGTCGCATGGACCAGGTGGTCCCTGTCGAACTGGATACGTCCGGACCGTCTGCGTCGTCTTGCGGACA GACATGTACCCTGGGCGGTTTACAGTGATATTCAGGGCGCGATTTTTCTCATCAATATGGGGGCTCTGCTGTGCGCTGGG GTCAGAACCCTGACTGCGCTGCAGGTTATCCACCGCTTTGCTTCTCCCTGGCTCGTTGTACGTCTGAACGCAGTGATGGA GGAAGTGGAGGAGGGGGCCTCTTTTGGTATGGCGCTGCGTGAATGTGGTTATGCCTTCCCCTCAAAAGAAGCCGTGAACT ATCTCTCTATGGTCAGTGGGGACGGGGCCGCTCAGATGATTGCGCGCTTTGGGCAGGAATGGCTCGAGGAAACTGTGAAG CGAGTTAACCGACGGGGAATAGCCGTGATGCTGTTCTCAATGGTGATGTTATTTGCGCTTATTGGCGTTGTGGTCGTGGC GGTGATTGAGGCGACTTCGATGACCGAGAGTATGGGGCAGTACTGA Protein sequence : MSPLYRLRRALARRFFTSGYRLRFYRMLSLQMRNGVKLLEALEQISNMYTDFGQRTHGFGFLVDDCRAALTDNSGDNSLE HALANWVPAEEAALISAGMFSGRLPEALAEAEILIDCRRRIRQAIMRMAVYPLGCIAMLGGTLGVIQTQLIPTLAGMSDP QTWTGVLGSLNGLLIFFTEHGVVMGAGLALLVAWTRWSLSNWIRPDRLRRLADRHVPWAVYSDIQGAIFLINMGALLCAG VRTLTALQVIHRFASPWLVVRLNAVMEEVEEGASFGMALRECGYAFPSKEAVNYLSMVSGDGAAQMIARFGQEWLEETVK RVNRRGIAVMLFSMVMLFALIGVVVVAVIEATSMTESMGQY |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| pilR | NP_458634.1 | putative membrane protein | Virulence | SPI-7 | Protein | 3e-153 | 100 |
| pilR | NP_807845.1 | hypothetical protein | Virulence | SPI-7 | Protein | 3e-153 | 100 |
| pilR | AAC98886.2 | PilR | Virulence | SPI-7 | Protein | 3e-153 | 100 |
| pilR | YP_001402684.1 | type IV pilus biogenesis protein PilR | Virulence | YAPI | Protein | 3e-59 | 50 |
| YE3501 | YP_001007662.1 | type IV pilus integral membrane protein | Virulence | YAPI | Protein | 1e-66 | 50 |
| pilR | CAF28491.1 | putative integral inner membrane protein | Virulence | YAPI | Protein | 1e-59 | 50 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| STBHUCCB_44970 | YP_005219917.1 | hypothetical protein | VFG2314 | Protein | 5e-67 | 50 |
