Gene Information

Name : STBHUCCB_44960 (STBHUCCB_44960)
Accession : YP_005219916.1
Strain : Salmonella enterica P-stx-12
Genome accession: NC_016832
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4400984 - 4402699 bp
Length : 1716 bp
Strand : +
Note : similar to Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB COG2804'; similar to Nucleotide-binding protein of root UniRef RepID=Q6JB01_ECOLX

DNA sequence : 
ATGTCTGAACACAACGATGCGGTTCTGCTTTACCACAACCCGGACACCACGATCCTCGAGCTGCTGGTTGACAGCCAGCG
GCGTACCGACGTGGCGGTGCAGCAGAAGGTAATGTCTCTGATGGAGGAAAACCCCGGTGTCACAATGAGGCTGGTAACCC
GTTCAGAGTTGCTCAGGTACAGTGAAATGGCTCGCCAGCAGTCAGAGAAGGGAGAAAAAGGACTTCGCCTTGAGGACATC
AAAAAAGAGGTCAGCAGCCGTCAGGGCGATGTTCTCAACTATTTTATGGTCGCGAAAGATATCGGCGCGTCTGATATTCA
CGGTACCACCCGGCCAGGACTGACGCGCATCGAGATGCGTGTGCACGGTGAACTGGAGACCGTTTCGGAACTGGCTGAAG
AAGACGGAAAAGCACAGGCGGCCACTATCATCCTTTCCATGTGTGATGTGACCGAACCCCAGTTCTACGCCGGCCGAAAA
CAGGATGGTCGTGTGGCTGCAAAGTTTCTGCGAAAGGTGGGGTTATTTGGCGCCCGTTACAGCCACACCCCGACAGCAGA
TGGCCTTCACTTTGTGATGCGCGTGATCCCGGATGATGGTGATGTGGTTCCCACGCTCGAAAAACTCGGTTTTCTGCCGA
AACAAATCCGCCTGATAAAGCGCACTTTGCGCCTGCCAGAAGGGATGATTATTTTGTCCGGCCCGACCGGAGCCGGGAAA
TCCACCACCCTGCGTGCCTGCAGCGACCTCTATCTGAAGCGTACCCGGTATAAAAAGCGCCTACTGACGGTTGAAGATCC
GCCGGAGGGACGCATCGTTGGGGCAATACAGACTCCTATTATCTGTGACAAAGCCGATGAGGCGGAAGTCAGGCTGGCCT
GGCAGCGGGTGCTGACCTCAGCGTTACGTCTCGATCCGGATGCCATTTTACCTGGTGAACTTCGTGACCTTATCTCCATT
CTGGCCGGGATTTTTGCCGCCCAGACCGGCCATCTGGTGCTGAGTACCCTGCATTCAAACTCGGCCTTTTCCATCCCTGA
GCGAATGATAACGATGGGTGCAAATGCCGGACTGGTGGCAGATGCCCAGTTGTTGGTCGGGCTTATCAGCCAGCGTCTGG
TTCAGGTGCTGTGTCCCGAGTGCCGTATTCCCTGGTCGGTTAAAAAAGAACATCTCACCACCGAAGAACGTGAATATCTG
GAAAAGTACTGTTCAGTGGAGGGGGTTTGTCAGCCCGAAAATCTTCATTTCAGAAATGAGGAGGGGTGCCCGACCTGCCG
GAAGGCGGTCATTATCGGTGGCAAACAGGTGGCAACAGTCGGTAAGGGGGTGGCCGGACGCAGTGTGGTGGCGGAGGTGG
TTCGCACGGATTCTACGCTTTTCAGGCTGTTATTACAGCAGGGTAAGGAAGCTGCAAAAGCTTACTGGATCCGTGAAATG
GGGGGGATTACCCGTCGCATTCATCTGCTTCACAAACTGAATGACGGGCTGGTTGACCCACTGGATGCCGATTTGATTAT
TCCTCTTGATGAGGATGAGGTGATGCAGGTGGTAAGTGATCAGGTTGCATCGTCGAGTGACATTGATACGTCGCTGATTG
AACGCCTTGCCATGGTAATTGCAGCCAGCGTCAGAGAGGGGATGAAGCAGGGTGTTGAGGAAGCCATTAAAGAAGGCGTT
GCTGCCGGGATGGCTGCGCTGAAGGAGGTTGCATGA

Protein sequence : 
MSEHNDAVLLYHNPDTTILELLVDSQRRTDVAVQQKVMSLMEENPGVTMRLVTRSELLRYSEMARQQSEKGEKGLRLEDI
KKEVSSRQGDVLNYFMVAKDIGASDIHGTTRPGLTRIEMRVHGELETVSELAEEDGKAQAATIILSMCDVTEPQFYAGRK
QDGRVAAKFLRKVGLFGARYSHTPTADGLHFVMRVIPDDGDVVPTLEKLGFLPKQIRLIKRTLRLPEGMIILSGPTGAGK
STTLRACSDLYLKRTRYKKRLLTVEDPPEGRIVGAIQTPIICDKADEAEVRLAWQRVLTSALRLDPDAILPGELRDLISI
LAGIFAAQTGHLVLSTLHSNSAFSIPERMITMGANAGLVADAQLLVGLISQRLVQVLCPECRIPWSVKKEHLTTEEREYL
EKYCSVEGVCQPENLHFRNEEGCPTCRKAVIIGGKQVATVGKGVAGRSVVAEVVRTDSTLFRLLLQQGKEAAKAYWIREM
GGITRRIHLLHKLNDGLVDPLDADLIIPLDEDEVMQVVSDQVASSSDIDTSLIERLAMVIAASVREGMKQGVEEAIKEGV
AAGMAALKEVA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
pilQ NP_807844.1 nucleotide-binding protein Virulence SPI-7 Protein 0.0 100
pilQ AAF14817.2 PilQ Virulence SPI-7 Protein 0.0 100
pilQ NP_458633.1 nucleotide-binding protein Virulence SPI-7 Protein 0.0 100
pilQ CAF28490.1 putative ATP binding protein Virulence YAPI Protein 8e-126 55
YpsIP31758_3731 YP_001402685.1 type IV secretion system protein Virulence YAPI Protein 3e-128 55
YE3502 YP_001007663.1 putative type IV pilus protein Virulence YAPI Protein 2e-125 55

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
STBHUCCB_44960 YP_005219916.1 hypothetical protein VFG2313 Protein 7e-126 55