|
Name : STBHUCCB_44940 (STBHUCCB_44940) Accession : YP_005219914.1 Strain : Salmonella enterica P-stx-12 Genome accession: NC_016832 Putative virulence/resistance : Virulence Product : hypothetical protein Function : - COG functional category : - COG ID : - EC number : - Position : 4399120 - 4400406 bp Length : 1287 bp Strand : + Note : similar to PilO of Salmonella enterica subsp. enterica UniRef RepID=C0Q5B4_SALPC DNA sequence : ATGGCAGATATTCCGTTATCCGGCAAGCCCCGTACGCAGGTTCTGCGCTGGCAGCGCCAGAACTGGGTAGCGGGGCTTCG CTGGGAAGAAAAGCAAAAGTCGGTACGTCGAGCCCCTGTACAACGTCGGGGTGTTCTGAACGTTGTGTTGACGGTGAAGC AGGGCAAGAGCCGGTTGACCGCGTTGGGGCAAATTGAGGCCGGCTGGCGTCACCAGAAGCTGTATTCCCTGGCGGCGCTG TTCAGCCAGCAGTGTACACCCAATGGCTATGGGGTATACCAGCTTGATGATGGCAGACAGGTCTTTCTGGCCACGGTGAA GGGGATGCCATCTCCGATGGCAGATGTGATCGGAACTCCAGATCAAATCATCCGGGCGAGAGAGCTCTTTCTGTCCTTCA ACCCTGCTCCTGAGGACGGATGGACGATACCTTCATCACCGGAATTCCCCTTGTCCTGGAACACTTTGGTCGGTCAGGTA TCTTCGGCACAGCTCCGGTTTGCCAGAGTGGCGGGCGTGTCTAATCCTTTGCGGCCATACGGGGCGGGAGTGCTGTCAGT GGCTGCCCTGCTTGGTGGTGCAGTCTGGTGGAGCAGGTTACCCGAACCTCCGGTCGCGCCTGTCGTGCAGGAGTTACCGG CACCGGTGCAGGACGTGTTTAAAAAAACACCTGAACCTGTTTACCTTCCACATCCCTGGGCAGATATGCCTGTGGCCAGA CACTTTCTGAACCGCTGTCAGCGCTGGCGCGCCGCAGTTCCTGTAAGTCTTGACCGTTGGCGTCTCGAACGGATTCGTTG CAGTGCTGAGGGGCTGGAGACGGTGTACCAGCGGCAGCCCGGTGGGACGGCGGCAGGCTTTGCGGAGCGGGTGAAGCAGG TTTTTAAGCGTACACCAGTATTCAACCTTGTTTCAGGTGGCAACGAAGGTGTGGTGTTTATTCCATGGGCGAAATTCACA TTACAGGATGAGACTGCGCCGGATGCGGGGACCCAGTTGATGCAGGCGGTGTCGTGGTTTCAGTCACGCCAGGTCAGTTT TTCTCTGTCCGAAGTGAAAACTCCTCCCGCGATGCCCGGTGATGGTGCCGGCAACGATGCGCCCCAGCCGATACAGGACT GGCATGAATACACGTTCAGTATCACTGATAAACACATGCCTGAGTGGATTTTACAGGGACTCGATATGCAGGGGGTACGG CTGAGTTCTGTGGGTTACACCCTGAGTCCTCAGGGACAGTTTACTTATCAGATTGAGGGGCATCTTTATGCTTATGCCAA AAAATAG Protein sequence : MADIPLSGKPRTQVLRWQRQNWVAGLRWEEKQKSVRRAPVQRRGVLNVVLTVKQGKSRLTALGQIEAGWRHQKLYSLAAL FSQQCTPNGYGVYQLDDGRQVFLATVKGMPSPMADVIGTPDQIIRARELFLSFNPAPEDGWTIPSSPEFPLSWNTLVGQV SSAQLRFARVAGVSNPLRPYGAGVLSVAALLGGAVWWSRLPEPPVAPVVQELPAPVQDVFKKTPEPVYLPHPWADMPVAR HFLNRCQRWRAAVPVSLDRWRLERIRCSAEGLETVYQRQPGGTAAGFAERVKQVFKRTPVFNLVSGGNEGVVFIPWAKFT LQDETAPDAGTQLMQAVSWFQSRQVSFSLSEVKTPPAMPGDGAGNDAPQPIQDWHEYTFSITDKHMPEWILQGLDMQGVR LSSVGYTLSPQGQFTYQIEGHLYAYAKK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| pilO | AAF14815.2 | PilO | Virulence | SPI-7 | Protein | 0.0 | 100 |
| pilO | NP_458631.1 | putative pilus assembly protein | Virulence | SPI-7 | Protein | 0.0 | 100 |
| pilO | NP_807842.1 | pilus assembly protein | Virulence | SPI-7 | Protein | 0.0 | 100 |
