Gene Information

Name : STBHUCCB_44410 (STBHUCCB_44410)
Accession : YP_005219870.1
Strain : Salmonella enterica P-stx-12
Genome accession: NC_016832
Putative virulence/resistance : Virulence
Product : Transcriptional regulatory protein BasR
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4350711 - 4351379 bp
Length : 669 bp
Strand : -
Note : similar to DNA-binding transcriptional regulator BasR PRK10643; similar to Transcriptional regulatory protein BasR of Enterobacteriaceae UniRef RepID=BASR_SALTY

DNA sequence : 
ATGAAGATACTGATTGTTGAAGACGACACGCTATTATTACAGGGGTTAATACTCGCCGCGCAAACCGAAGGCTATGCGTG
TGATGGCGTTTCGACAGCGCGTGCCGCCGAGCATAGTCTGGAGTCTGGTCATTACAGTCTGATGGTGCTGGATTTAGGGC
TGCCCGATGAGGATGGCCTGCATTTCCTGACGCGAATCCGACAGAAAAAATACACCCTGCCGGTACTCATTCTGACCGCC
CGCGATACGCTCAACGACCGCATTAGCGGGCTGGATGTCGGCGCAGATGATTATCTGGTAAAACCCTTCGCCCTGGAGGA
GCTGCACGCCCGCATCCGCGCGTTGCTGCGCCGCCATAATAACCAGGGTGAAAGTGAACTGACGGTTGGCAATCTGACGC
TCAATATAGGCCGCCATCAGGCATGGAGGGATGGACAGGAACTGACCCTGACGCCTAAGGAGTACGCGCTGCTCTCACGA
TTGATGCTCAAGGCAGGCAGTCCGGTGCACCGGGAAATTCTTTATAACGATATCTACAACTGGGATAACGAACCCTCGAC
CAACACTCTGGAAGTGCATATACATAATTTGCGCGACAAAGTCGGCAAGTCGCGCATTCGCACGGTTCGCAGGTTTGGCT
ACATGCTGGTTGCCACTGAGGAAAGCTAA

Protein sequence : 
MKILIVEDDTLLLQGLILAAQTEGYACDGVSTARAAEHSLESGHYSLMVLDLGLPDEDGLHFLTRIRQKKYTLPVLILTA
RDTLNDRISGLDVGADDYLVKPFALEELHARIRALLRRHNNQGESELTVGNLTLNIGRHQAWRDGQELTLTPKEYALLSR
LMLKAGSPVHREILYNDIYNWDNEPSTNTLEVHIHNLRDKVGKSRIRTVRRFGYMLVATEES

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
armR AAN62112.1 putative response-regulator ArmR Not tested PAGI-2(C) Protein 8e-30 43
copR NP_460069.2 transcriptional regulatory protein YedW Not tested SPI-5 Protein 3e-22 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
STBHUCCB_44410 YP_005219870.1 Transcriptional regulatory protein BasR BAC0487 Protein 1e-53 60

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
STBHUCCB_44410 YP_005219870.1 Transcriptional regulatory protein BasR VFG0473 Protein 2e-90 99
STBHUCCB_44410 YP_005219870.1 Transcriptional regulatory protein BasR VFG0596 Protein 1e-22 41