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Name : STBHUCCB_44070 (STBHUCCB_44070) Accession : YP_005219838.1 Strain : Salmonella enterica P-stx-12 Genome accession: NC_016832 Putative virulence/resistance : Virulence Product : Cation efflux pump Function : - COG functional category : - COG ID : - EC number : - Position : 4299504 - 4300754 bp Length : 1251 bp Strand : + Note : similar to Cation efflux pump of Enterobacteriaceae UniRef RepID=D0ZRX6_SALT1 DNA sequence : ATGATGATAATTATTTCTTTGACGATCTTAATTATTATCCTTACCTACTTTATAGAAATTAATTCAGTGGTTCATGGTCA GGGTGTTATCACTACTAAAGATAATGCTCAGTTAATATCTCTTTCTAAAGGAGGGACGATACAAGATATTTATGTGGCCG AGGGGGATACTGTAAAAAAAGGAGAACTCCTTGCAAAGGTCGTTAACTTTGATCTGCAAAAAGAATATCAAAGGTATAGA ACTCAAAAAGGGTATCTGGATAAAGATGTTAACGAAATATCTTTCATTCTTGATAAAGAAAATGAGAGTGGATTGATTAC CCTGGATGGCACCCGTTCTTTAAGCAACAAAGAGGTAAAAGCGAATATTGAATTAGTGCATAGTCAGATAAGAGCTAAAG AGTTAAAAAAAACCTCTCTTGATTCTGAGATTAGCGGATTACAAGAGAAGCTAAGTTCGAAAGAAAAAGAACTAGCATTG CTTGCCGAAGAAATAAATATTCTTTCTCCACTGGTAAAAAAAGGAATTAGCCCATATACCAATTTTCTTAACAAGAAACA GGCGTATATAAAAGTTAAGTCTGAAATTAATGATATTGAAAGTAGCATCACTTTAAAAAAAGATGATATTGAGCTGGTTG TTAATGATATTGAGGCGCTTAATAATGAATTGCGATTATCTTTATCTAAAATAATATCTAAAAATCTTCAGGAACTTGAG GTTGTTAACTCTACATTAAAAGTAATAGAGAAGCAGATAAATGAGGAGGATATCTATTCACCGGTTGACGGTGTAATTTA TAAAATCAATAAAAGTGCCACTACTCATGGTGGTGTGATTCAGGCGGCGGACTTACTTTTTGAAATAAAACCAAAAGTAA GGACTATGCTGGCCGATGTGAAAATACTACCAAAATACCGTGACCAAATATATGTAGATGAAGCCGTTAAGCTAGATGTC CAGTCAATTATTCAACCAAAGATAAAATCGTATAATGCGACTATCGATAATATTAGCCCTGACTCTTATGAGGAAAATAC CGGAGGAACAATTCAGCGTTATTATAAAGTAATTATTGCATTCGATGTTAATGAAGATGATTTACGGTGGTTAAAACCAG GTATGACTGTTGACGCCAGTGTAATTACCGGAAAACACAGCATTATGGAATACCTGTTATCTCCTTTGATGAAAGGCGTG GACAAAGCCTTTTCAGAACCAGTTAATACTAAACGATTAGATACACCTTGA Protein sequence : MMIIISLTILIIILTYFIEINSVVHGQGVITTKDNAQLISLSKGGTIQDIYVAEGDTVKKGELLAKVVNFDLQKEYQRYR TQKGYLDKDVNEISFILDKENESGLITLDGTRSLSNKEVKANIELVHSQIRAKELKKTSLDSEISGLQEKLSSKEKELAL LAEEINILSPLVKKGISPYTNFLNKKQAYIKVKSEINDIESSITLKKDDIELVVNDIEALNNELRLSLSKIISKNLQELE VVNSTLKVIEKQINEEDIYSPVDGVIYKINKSATTHGGVIQAADLLFEIKPKVRTMLADVKILPKYRDQIYVDEAVKLDV QSIIQPKIKSYNATIDNISPDSYEENTGGTIQRYYKVIIAFDVNEDDLRWLKPGMTVDASVITGKHSIMEYLLSPLMKGV DKAFSEPVNTKRLDTP |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| STY4457 | NP_458557.1 | putative type-I secretion protein | Not tested | SPI-4 | Protein | 1e-170 | 100 |
| siiD | CAE11796.1 | putative type-I secretion protein, putative inner membrane component | Virulence | SPI-4 | Protein | 7e-170 | 99 |
| SC4139 | YP_219126.1 | membrane permease, cation efflux pump | Not tested | SPI-4 | Protein | 9e-170 | 99 |
| STM4260 | NP_463125.1 | cation efflux pump | Not tested | SPI-4 | Protein | 9e-170 | 99 |
| spi4_D | AAC26642.1 | HLYD family secretion protein | Virulence | SPI-4 | Protein | 7e-170 | 99 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| STBHUCCB_44070 | YP_005219838.1 | Cation efflux pump | VFG0580 | Protein | 4e-170 | 99 |
