Gene Information

Name : STBHUCCB_44060 (STBHUCCB_44060)
Accession : YP_005219837.1
Strain : Salmonella enterica P-stx-12
Genome accession: NC_016832
Putative virulence/resistance : Virulence
Product : ABC exporter outer membrane component
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4298566 - 4299480 bp
Length : 915 bp
Strand : +
Note : similar to Outer membrane protein COG1538; similar to ABC exporter outer membrane component homolog of Salmonella enterica UniRef RepID=O85313_SALTY

DNA sequence :
GTGACAACCTATTACAACATCAGTAAATATCGTGAAATGATTGATGGCGTAAATCTGGAGAAAGAGTTTTATAAAAAGAT
GCTGGAAACTTTTTCGCTACTGGTATCTTCCGGTGTAGCTATGCAATCTGATATGCGTAAAGTACAAGTATCTATCGATG
CATTAAATACCAGAAGTATTATGTATCAGTCGATGCTGGATGATGAAATGTATAAAATGCAGAATATGACTGGTCTGAAT
TTATCACCAGATCAGATTCAAAGCGATGAAAAATTCAACCTCTTCAAAAAATATATCTTTGTCGAAAGCCCTGAAAAACT
TATGGACATGGTGATGAAATACAACGATGACTATAAGATGCTTGTCAATACCCGAAAAGCTGCGACCGAAGATATTAATG
CCGCAAAATCATCCTATTTTCCGACTGTAGATCTCGTTTCCAGCTATGTACAGAATAATCCGAGCGGTAGTGCCAAAAAA
AGTGATTATGAAGATGAATTTAAAACGGGTATCAATGTCAGTTTCAACATTTTTAATGGGTTTAGAAATGCAGCCCAGGA
AAGAAAAATGGTGGCAAGTTACTCGCAGGCTAAGCTGCAAATTGACGATTTCTTGATTAAAACTCGTTATAACATTGATT
CACAACTTTCAAAATACACCGCTGCAAAAGAGACTTACTCAGTGGCGGAACGTTCACATACAAACGCGTTACAGCTTACT
GAATTATATGAGCAGGAGTTTCAGTTAGGGCAAAAAAGTTTGCTTGATTTAATTTCAAGCCGTAATGAAGCATTTCAGGC
ATATGTAAGCATGATCGACAGCAAATATAGCCTGTATATTTTAAAGCTACAGCAACTCTCATTGATTTTTCATTTAATGG
ATTATTTAAAAAGTGAGTTAAATGTAATGAAATGA

Protein sequence :
MTTYYNISKYREMIDGVNLEKEFYKKMLETFSLLVSSGVAMQSDMRKVQVSIDALNTRSIMYQSMLDDEMYKMQNMTGLN
LSPDQIQSDEKFNLFKKYIFVESPEKLMDMVMKYNDDYKMLVNTRKAATEDINAAKSSYFPTVDLVSSYVQNNPSGSAKK
SDYEDEFKTGINVSFNIFNGFRNAAQERKMVASYSQAKLQIDDFLIKTRYNIDSQLSKYTAAKETYSVAERSHTNALQLT
ELYEQEFQLGQKSLLDLISSRNEAFQAYVSMIDSKYSLYILKLQQLSLIFHLMDYLKSELNVMK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SC4138 YP_219125.1 ABC transporter outer membrane protein Not tested SPI-4 Protein 2e-134 98
STM4259 NP_463124.1 ABC exporter outer membrane component Not tested SPI-4 Protein 2e-134 98
siiC CAE11795.1 putative type-I secretion protein, putative outer membrane component Virulence SPI-4 Protein 2e-134 98
spi4_C AAC26641.1 ABC exporter outer membrane component homolog Virulence SPI-4 Protein 3e-134 97

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
STBHUCCB_44060 YP_005219837.1 ABC exporter outer membrane component VFG0579 Protein 1e-134 98