Gene Information

Name : STBHUCCB_44050 (STBHUCCB_44050)
Accession : YP_005219836.1
Strain : Salmonella enterica P-stx-12
Genome accession: NC_016832
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4296795 - 4298183 bp
Length : 1389 bp
Strand : +
Note : similar to Putative uncharacterized protein of Salmonella enterica UniRef RepID=A9MGM5_SALAR

DNA sequence :
GTGAAATATATAAATCATTATCGCTATTTGTTTGTCTGTTTTTTCCTTGCCATACTCCCTTTTTTCGCTTTATCTTTTCC
CGGTATAAGAGAGTATGTTTTTGATAATTTTATGGTTTCTGCAATTTACAATGGAGTCATTATTGCCATTTATATTACAG
GTTCTTTGTGTGCATTATTCACTATTCTTAAAAATATTTCAGCAAAAGACATATTAATAGCTCAGGACGCCAGTAGAAAA
AATAGCATTCTTTCTAACCTCAATCAGGTTTTGTTTGCCGGGGAACCCAAACAGTGTGATTTCAATTTACTGATGGAATT
AGATGACAATGTGTCTACCGCCCGTAACCAACGATTGTCATTTATTATGAGCTGTAGCAATGTGTCGACGCTTGTTGGCC
TGTTGGGGACGTTTGCGGGTCTGTCTATTACGATTGGTTCAATCGGGAACTTATTGAGCTCGCCATCAGATGTTGGCGGT
GATAATGCAAGTAATACACTCAATATGATTGTGACAATGGTAGCGTCGCTTTCTGAACCATTGAAAGGGATGAATACCGC
ATTTGTATCTTCTATCTATGGTGTTGTTTGCGCCATACTCCTGACCTCACAAAGTGTTTTTGTTCGCAGCTCCTATTCCC
TTGTTTCTACAGAGATCAAAAAATTAAAAATCATAAGTAACAGATCCAATAATAAACAACGAAGCCTGCGGGTTGAATCA
GAGACGCTTGTAGAATTTAAAGAGTTGTTTAAAGCGTTTTTTGATAACTACCTGACAGTTGAAAACTTACGGACGCAGGA
TGAAGAAAAGAAACGAGTGATGCTATCAGATAGCTTTGTCACTTTGCAAAACCGACTATTGGATAACTCAGCAAAACTGG
AACAACTTTCTACGCTGATTGATGGTTATCTGGTAAGCAATAACGAAAATACCAAAAAATTAGTTGACGGTGTAATAACA
ATTACCTCTCGTTTATCTGAAGGTAATACCCTGCTTGCTGATAATAATGCACGACTGGAGGCAATGAGTACAATACAAAA
TATTATAGACAAAAAGAATGATTCAATAATGGCATCAGTTGATAAATGTTATCAGGAATCTTTTTCACATGGTAAGACCA
TAAACGATATTGCCGCTGGCAGTGCCGATATTTCTCATACTCTCGATGGGCTGAGAAAAGAAATGGATGAGGATATGAAT
AATGTTCATTTAGCGCTATCCGATCTATCGGCTACTGATAAAAAGATTATTGCCAATACTAAAGAGATTAGTGCTGAAAT
GGTTAGCTATCGTGATACCTATATGCCATTAATGGAAAAAATAACATCTATGCATCAGGAAATAGTAAAGCAACGTTTGT
TAAACAAGGAGGAAAAAAATGAAGATTAA

Protein sequence :
MKYINHYRYLFVCFFLAILPFFALSFPGIREYVFDNFMVSAIYNGVIIAIYITGSLCALFTILKNISAKDILIAQDASRK
NSILSNLNQVLFAGEPKQCDFNLLMELDDNVSTARNQRLSFIMSCSNVSTLVGLLGTFAGLSITIGSIGNLLSSPSDVGG
DNASNTLNMIVTMVASLSEPLKGMNTAFVSSIYGVVCAILLTSQSVFVRSSYSLVSTEIKKLKIISNRSNNKQRSLRVES
ETLVEFKELFKAFFDNYLTVENLRTQDEEKKRVMLSDSFVTLQNRLLDNSAKLEQLSTLIDGYLVSNNENTKKLVDGVIT
ITSRLSEGNTLLADNNARLEAMSTIQNIIDKKNDSIMASVDKCYQESFSHGKTINDIAAGSADISHTLDGLRKEMDEDMN
NVHLALSDLSATDKKIIANTKEISAEMVSYRDTYMPLMEKITSMHQEIVKQRLLNKEEKNED

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
STY4453 NP_458555.1 putative integral membrane protein Not tested SPI-4 Protein 0.0 100
mac YP_219124.1 methyl-accepting chemotaxis protein Not tested SPI-4 Protein 0.0 99
STM4258 NP_463123.1 methyl-accepting chemotaxis protein Not tested SPI-4 Protein 0.0 98
siiB CAE11794.1 putative inner membrane protein Virulence SPI-4 Protein 0.0 98

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
STBHUCCB_44050 YP_005219836.1 hypothetical protein VFG0578 Protein 0.0 98