Gene Information

Name : STBHUCCB_44010 (STBHUCCB_44010)
Accession : YP_005219832.1
Strain : Salmonella enterica P-stx-12
Genome accession: NC_016832
Putative virulence/resistance : Virulence
Product : Single-stranded DNA-binding protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4294583 - 4295113 bp
Length : 531 bp
Strand : +
Note : similar to single-stranded DNA-binding protein PRK09010; similar to Single-stranded DNA-binding protein of Enterobacteriaceae UniRef RepID=A6TIR6_KLEP7

DNA sequence : 
ATGGCCAGCAGAGGCGTAAACAAGGTGATTCTCGTTGGTAATCTGGGCCAGGACCCGGAAGTACGCTATATGCCGAGTGG
CGGTGCTGTCGCCAACTTAACGCTGGCTACTTCTGAATCCTGGCGCGATAGGCAGACCGGCGAAATGAAAGAGCAGACTG
AATGGCACCGGGTGGTGATGTTCGGCAAACTGGCGGAAGTGGCCGGCGAATATCTGCGTAAAGGTTCTCAGGTGTATATC
GAAGGTCAATTGCGTACCCGCAAGTGGACCGATCAGAGTGGCCAGGAACGCTATACGACTGAAATTAACGTTCCGCAGAT
CGGCGGCGTGATGCAGATGCTGGGTGGTCGCCAGGGCGGCGGCGCACCGGCAGGCGGTCAGCAGCAGGGGGGTTGGGGTC
AGCCGCAACAACCTCAGCAGCCGCAGGGCGGTAACCAGTTCAGCGGCGGCGCGCAGTCGCGTCCACAGCAATCCGCGCCA
GCGCCGTCTAACGAACCGCCAATGGATTTTGACGACGACATTCCGTTCTGA

Protein sequence : 
MASRGVNKVILVGNLGQDPEVRYMPSGGAVANLTLATSESWRDRQTGEMKEQTEWHRVVMFGKLAEVAGEYLRKGSQVYI
EGQLRTRKWTDQSGQERYTTEINVPQIGGVMQMLGGRQGGGAPAGGQQQGGWGQPQQPQQPQGGNQFSGGAQSRPQQSAP
APSNEPPMDFDDDIPF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ssb AAC26638.1 single-strand binding protein Not tested SPI-4 Protein 1e-41 78
ssb AAF14810.1 single strand binding protein Not tested SPI-7 Protein 4e-41 62
ssB NP_458627.1 single strand binding protein Not tested SPI-7 Protein 5e-41 62
ssb NP_807839.1 single-stranded DNA-binding protein Not tested SPI-7 Protein 5e-41 62

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
STBHUCCB_44010 YP_005219832.1 Single-stranded DNA-binding protein VFG0576 Protein 5e-53 99