Gene Information

Name : STBHUCCB_42020 (STBHUCCB_42020)
Accession : YP_005219636.1
Strain : Salmonella enterica P-stx-12
Genome accession: NC_016832
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4100485 - 4101246 bp
Length : 762 bp
Strand : -
Note : similar to Uncharacterized membrane protein COG5426; similar to Cytoplasmic protein of Enterobacteriaceae UniRef RepID=C2DPG1_ECOLX

DNA sequence : 
ATGAACAATACGCAGAAAAAACTAAAGGTGCTCTTTATTGGAGAATCCTGGCATATTCATATGATTCATTCAAAAGGTTA
TGACAGTTTCACCTCCAGTAAATATGAAGAAGGCGCGACATGGTTACTGGAATGCCTGAGGAAAGGCGGCGTTGATATTG
ATTACATGCCTGCCCACACGGTACAAATTGCCTTTCCAGAGAGTATTGACGAATTAAATCGTTATGATGTGATTGTTATT
AGCGACATTGGTAGTAATACCTTCCTGCTACAAAATGAAACCTTCTATCAGCTAAAAATAAAACCAAACGCTCTGGAATC
CATTAAAGAGTACGTCAAAAATGGCGGTGGACTACTCATGATTGGCGGTTATCTGTCATTTATGGGTATTGAGGCAAAAG
CCAATTATAAGAACACCGTTCTTGCTGAGGTTCTGCCAGTTATTATGCTTGACGGCGATGACCGGGTAGAAAAGCCAGAG
GGTATTTGTGCTGAGGCTGTCTCACCTGAACATCCTGTTGTTAACGGGTTCTCAGATTACCCGGTATTTCTTGGATATAA
CCAGGTCGTCGCCAGAGACGATGCCGATGTCGTATTAACAATAAATAATGACCCATTGTTAGTGTTCGGTGAATACCAAC
AGGGTAAAACCGCCTGCTTTATGAGTGACTGCTCCCCACACTGGGGAACCCAGCAGTTTATGTCATGGCCATTTTATACC
GACCTGTGGGTCAACACGCTTCAATTCATCGCCAGAAAATAA

Protein sequence : 
MNNTQKKLKVLFIGESWHIHMIHSKGYDSFTSSKYEEGATWLLECLRKGGVDIDYMPAHTVQIAFPESIDELNRYDVIVI
SDIGSNTFLLQNETFYQLKIKPNALESIKEYVKNGGGLLMIGGYLSFMGIEAKANYKNTVLAEVLPVIMLDGDDRVEKPE
GICAEAVSPEHPVVNGFSDYPVFLGYNQVVARDDADVVLTINNDPLLVFGEYQQGKTACFMSDCSPHWGTQQFMSWPFYT
DLWVNTLQFIARK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
APECO1_1077 YP_853097.1 hypothetical protein Not tested PAI IV APEC-O1 Protein 2e-103 81
ORF 245 CAB37418.1 - Not tested SPI-2 Protein 1e-77 65
SC1402 YP_216389.1 hypothetical protein Not tested SPI-2 Protein 2e-77 65
orf245 NP_460346.1 hypothetical protein Not tested SPI-2 Protein 2e-77 65
STY1741 NP_456145.1 Orf 245 protein Not tested SPI-2 Protein 4e-77 64
t1249 NP_805053.1 hypothetical protein Not tested SPI-2 Protein 4e-77 64

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
STBHUCCB_42020 YP_005219636.1 hypothetical protein VFG0482 Protein 8e-78 65