Gene Information

Name : STBHUCCB_40560 (STBHUCCB_40560)
Accession : YP_005219496.1
Strain : Salmonella enterica P-stx-12
Genome accession: NC_016832
Putative virulence/resistance : Unknown
Product : L-ribulose-5-phosphate 3-epimerase sgbU
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3958145 - 3959005 bp
Length : 861 bp
Strand : -
Note : similar to putative L-xylulose 5-phosphate 3-epimerase PRK13210; similar to Putative L-ribulose-5-phosphate 3-epimerase sgbU of Bacteria UniRef RepID=SGBU_ECOLI

DNA sequence :
ATGCGTAATCATCCATTAGGTATTTACGAGAAAGCACTGGCGAAAGATCTCAGTTGGCCAGAGCGGCTGGTGCTGGCAAA
AAGCTGCGGTTTTGATTTTGTTGAGATGTCGGTGGATGAAACCGACGAACGTCTCTCACGCCTGGAGTGGACCTCGGCCC
AACGCGCTTCGCTGGTGAACGCGATGCTGGAAAGCGGCGTCGCCATCCCGTCGATGTGCCTCTCCGCCCATCGTCGCTTC
CCTTTTGGCAGCCGCGACGAAGCGGTACGCCAGCGGGCGCGTGAAATCATGACCAAAGCCATTCGCCTGGCGCGCGACCT
GGGGATCCGCACCATCCAGTTGGCAGGTTACGACGTCTATTACGAAGAGCACGACGAAGGCACCCAGCAACGTTTCGCCG
AAGGGCTGGCGTGGGCGGTGGAACAGGCCGCAGCGGCGCAGGTGATGCTGGCGGTGGAGATCATGGATACCGCGTTTATG
AACTCCATCAGCAAGTGGAAAAAGTGGGACGAGATGCTTTCGTCACCGTGGTTCACCGTTTATCCAGACGTCGGCAACCT
CAGCGCCTGGGGGAACGACGTGACCGCCGAGCTGAAGCTGGGTATCGACCGTATCGCCGCGATCCACCTGAAAGACACGC
TGCCGGTGACCGGTGACAACCCCGGCCAGTTCCGCGACGTGCCGTTTGGCGAAGGATGCGTTGATTTTGTCAGCATCTTC
AAAACGCTGCATGAGCTGAACTATCGCGGTTCATTTCTGATTGAGATGTGGACAGAGAAAGCCAGCGAGCCGGTGCTGGA
AATTATCCAGGCCCGCCGCTGGATTGAATCACGGATGCAGGAAGGAGGTTTCACATGTTAG

Protein sequence :
MRNHPLGIYEKALAKDLSWPERLVLAKSCGFDFVEMSVDETDERLSRLEWTSAQRASLVNAMLESGVAIPSMCLSAHRRF
PFGSRDEAVRQRAREIMTKAIRLARDLGIRTIQLAGYDVYYEEHDEGTQQRFAEGLAWAVEQAAAAQVMLAVEIMDTAFM
NSISKWKKWDEMLSSPWFTVYPDVGNLSAWGNDVTAELKLGIDRIAAIHLKDTLPVTGDNPGQFRDVPFGEGCVDFVSIF
KTLHELNYRGSFLIEMWTEKASEPVLEIIQARRWIESRMQEGGFTC

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
M5005_Spy_0152 YP_281516.1 L-xylulose 5-phosphate 3-epimerase Not tested Not named Protein 1e-57 55