Gene Information

Name : STBHUCCB_39990 (STBHUCCB_39990)
Accession : YP_005219441.1
Strain : Salmonella enterica P-stx-12
Genome accession: NC_016832
Putative virulence/resistance : Unknown
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3899248 - 3899913 bp
Length : 666 bp
Strand : +
Note : similar to DNA repair protein RadC PRK00024; similar to UPF0758 protein yicR of Bacteria UniRef RepID=YICR_SALA4

DNA sequence :
ATGGATACGTTGGACGAATTATTGCCGCGTGAAAAAATGCTCAGATCCGGCATTGCTTCCCTCAGCGACGTGGAACTGCT
GGCGCTTTTTTTACGTACCGGCACGCCGGGAAAAGATGTTATGACGTTGGCAAAAGAGATATTGCAGCACTTTGGGTCGC
TGTATGGCCTGCTGTCGGCGGACTTTGCGCAGTTTCGCGGCGTAAACGGCATCGGCCTGGCGAAATTCGCGCAGTTGAAA
GGCATTGCTGAGCTGGCAAGGCGCTATTACAGCGTGCGCATGAATGAGGAAAGTGCGTTGCTGAGTCCGGAAATGACGCG
GGAATTTCTGCAAAGCCAACTGACGGGCGAAGAGCGTGAGATCTTTCTGGTGATCTTCCTAGATGCCCAGCACCGGGTGC
TTCAGCACAGCCGCCTGTTTTCCGGCACGCTTAACCACGTAGAGGTGCATCCGCGTGAGATTGTTCGGGAAGCGATTAAA
CTCAATGCTTCAGCGGTCATTCTGGCGCATAATCACCCTTCAGGCTGCGCAGAGCCAAGTAAAGCAGATAAACTTATCAC
TGAGCGCGTGATAAAGTGTTGCCAGTTTATGGATATCCGGGTGCTCGATCACCTGATAATTGGGCGCGGAGAGTACGTTT
CTTTTGCCGAACGCGGCTGGATTTAA

Protein sequence :
MDTLDELLPREKMLRSGIASLSDVELLALFLRTGTPGKDVMTLAKEILQHFGSLYGLLSADFAQFRGVNGIGLAKFAQLK
GIAELARRYYSVRMNEESALLSPEMTREFLQSQLTGEEREIFLVIFLDAQHRVLQHSRLFSGTLNHVEVHPREIVREAIK
LNASAVILAHNHPSGCAEPSKADKLITERVIKCCQFMDIRVLDHLIIGRGEYVSFAERGWI

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
VPI2_0034 ACA01849.1 DNA repair protein RadC Not tested VPI-2 Protein 2e-25 44