Gene Information

Name : STBHUCCB_39670 (STBHUCCB_39670)
Accession : YP_005219413.1
Strain : Salmonella enterica P-stx-12
Genome accession: NC_016832
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3868492 - 3869109 bp
Length : 618 bp
Strand : -
Note : similar to RmbA of Enterobacteriaceae UniRef RepID=B4SXG3_SALNS

DNA sequence :
ATGATGAGAAAGCCTTCACAAATTGTCCATTGCATTAGTTGCGATTTATCCTGTCAATTATTCCCTGACAGCGCAGTACG
GGTGCAATACTGTCATAATGCGGCATTTTCCATCTGGCCAGATGGTAATGCTTTCCTGAAAAAAGGGTTTATTGAAAAGT
TATTGCTTGATAGACACAACCATTTATCCAGCGGTTTTATCTTTGTTGATTTTTCTTTCCCGAATCTTCGACGATTTACC
GATTTACAATGGGCTGACAGTCTGGCAAACAGTGGTATGCATATTGTCCTGATTTCTGACAGAAGTTTAACTCCGCTGGC
CAATTACTGGATTTTGAAAAGCAATAAAATACAAGGAATTATTTATTCCGATGACGATGATATTGTGCAACAGCAAAAGA
TGCACCGCTTGTTTACCGGTCGGCTTGCCAACAGTAAACGTGGACGAACGCTTAACTATACGGAATTTATATTACTGAAG
CACTTTGTATCAGGAATAAGTATTCAGCAGATTGTAAATATTGACAATATTGATATTAAGAAACTTTATGTGCATAAGCT
GCGGCTTGAAAATAAGCTAGGGCATAGCATTCATAAAATAATATCAAATATTTTATAG

Protein sequence :
MMRKPSQIVHCISCDLSCQLFPDSAVRVQYCHNAAFSIWPDGNAFLKKGFIEKLLLDRHNHLSSGFIFVDFSFPNLRRFT
DLQWADSLANSGMHIVLISDRSLTPLANYWILKSNKIQGIIYSDDDDIVQQQKMHRLFTGRLANSKRGRTLNYTEFILLK
HFVSGISIQQIVNIDNIDIKKLYVHKLRLENKLGHSIHKIISNIL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
rmbA NP_458174.1 conserved hypothetical protein Not tested SPI-3 Protein 5e-87 100
rmbA YP_218664.1 hypothetical protein Not tested SPI-3 Protein 4e-86 99
rmbA NP_462655.1 hypothetical protein Not tested SPI-3 Protein 2e-86 99
unnamed AAO49826.1 RmbA Not tested SPI-3 Protein 9e-86 99
rmbA AAD16953.1 RmbA Not tested SPI-3 Protein 1e-86 99

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
STBHUCCB_39670 YP_005219413.1 hypothetical protein VFG0567 Protein 5e-87 99