Gene Information

Name : STBHUCCB_39640 (STBHUCCB_39640)
Accession : YP_005219412.1
Strain : Salmonella enterica P-stx-12
Genome accession: NC_016832
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3864989 - 3865453 bp
Length : 465 bp
Strand : +
Note : similar to O94 of Enterobacteriaceae UniRef RepID=B5EY31_SALA4

DNA sequence :
ATGTTAGCCTGCCTGACGCTACTGTTTCTGGGTGTAGGGCTTGGGCATCTTTTTCATTTATATACGGAAAAGAACCGGGA
TCCAGAGAAATGTACGGCGCCTGTGATTGTGTTTTATAACAACACTCAGGCTAACCTGACGCTGGACTTTATGTATTCGC
TGAAAAAACGCACTGGAGTGGTTTCCATCAGCGGAACGTATTACGTCGATAATAAAATGAGCGGCGTGATCCGCCGTGAT
GTTTCCTATGTATGGAGTGAAAATAAAGACAGCACCCATTTTATATCGACGGATATCAACAAAGTCACGCGTGACGAAAC
ACTGTCCGATGCGGTTATCGAGACGGTTTTACCCGATTTTTATGTCTATCCAGGGAAAAGTATCAGTTACACCATCCTGA
CTCAGGGTCATCGTGGCTTTATGTTCACCATCGGGAAACGCCCGATATTTTTCTGTACACATTAA

Protein sequence :
MLACLTLLFLGVGLGHLFHLYTEKNRDPEKCTAPVIVFYNNTQANLTLDFMYSLKKRTGVVSISGTYYVDNKMSGVIRRD
VSYVWSENKDSTHFISTDINKVTRDETLSDAVIETVLPDFYVYPGKSISYTILTQGHRGFMFTIGKRPIFFCTH

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
fidL NP_458173.1 putative exported protein Virulence SPI-3 Protein 6e-59 100
fidL YP_218666.1 inner membrane protein Virulence SPI-3 Protein 5e-59 100
fidL AAD16955.1 FidL Virulence SPI-3 Protein 8e-59 99
fidL NP_462657.1 inner membrane protein Virulence SPI-3 Protein 1e-58 99
ECs3705 NP_311732.1 hypothetical protein Not tested LIM Protein 2e-24 44

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
STBHUCCB_39640 YP_005219412.1 hypothetical protein VFG0569 Protein 3e-59 99