Gene Information

Name : STBHUCCB_39590 (STBHUCCB_39590)
Accession : YP_005219409.1
Strain : Salmonella enterica P-stx-12
Genome accession: NC_016832
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3861808 - 3862281 bp
Length : 474 bp
Strand : +
Note : similar to CigR of Enterobacteriaceae UniRef RepID=Q9Z621_SALTY

DNA sequence :
ATGGCGGGGCGCTATTTTCATGGTATCCCACATGAGAAGGGCAATATCATGAATAATCGTCGTGGTTTAACCGCCGTCCT
GGCGACGTTGATTACGTTTTCCCTGAGCGCTACGCCTGTGCTGGCGAATCCGGGAAATGGCAATGGCGGCGGACATGGTA
ATAACGCGGCTAATCAGGGTAATAACGGTAACGGACATAAAGGAAATGCCGGGCAAAAAACGGAACACCGTAAAAATGGC
GGTAAACCGGATCACGTCGAGTCGGACATTAGCTACGCTGTCGCCAGGCAACTGGCAGTGAATTTAGGGCTGACGGGTTA
TCAGTCTTTACCTCCGGGGATTGCGAAAAATCTGGCGAGAGGAAAACCGCTGCCGCCGGGAATCGCTAAAAAACGGTGCC
GGCGTCTATGCTGGGACAATTACCTTATTATCCGGGCTATGAGTGGAAAATCGTTGGGGATAATCTGGTGCTGA

Protein sequence :
MAGRYFHGIPHEKGNIMNNRRGLTAVLATLITFSLSATPVLANPGNGNGGGHGNNAANQGNNGNGHKGNAGQKTEHRKNG
GKPDHVESDISYAVARQLAVNLGLTGYQSLPPGIAKNLARGKPLPPGIAKKRCRRLCWDNYLIIRAMSGKSLGIIWC

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cigR NP_462661.1 inner membrane protein Virulence SPI-3 Protein 3e-28 100
cigR AAD16958.1 CigR Virulence SPI-3 Protein 2e-28 100
cigR YP_218670.1 inner membrane protein Not tested SPI-3 Protein 2e-27 98

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
STBHUCCB_39590 YP_005219409.1 hypothetical protein VFG0573 Protein 8e-29 100